Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-3Q5R1E6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-3Q5R1E6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-3Q5R1E6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav6-3Q5R1E6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-3Q5R1E6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Trav6-3Q5R1E6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-3Q5R1E6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-3Q5R1E6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.02□□□□□ -0.32
Trav6-3Q5R1E6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Trav6-3Q5R1E6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav6-3Q5R1E6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-3Q5R1E6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-3Q5R1E6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-3Q5R1E6 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-3Q5R1E6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Trav6-3Q5R1E6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav6-3Q5R1E6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-3Q5R1E6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-3Q5R1E6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-3Q5R1E6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-3Q5R1E6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-3Q5R1E6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav6-3Q5R1E6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-3Q5R1E6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-3Q5R1E6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-3Q5R1E6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-3Q5R1E6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-3Q5R1E6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-3Q5R1E6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Mir1668-201ENSMUST00000184114 107 ntBASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Gm10566-201ENSMUST00000086739 996 ntBASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-3Q5R1E6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Gm44616-201ENSMUST00000206417 1732 ntBASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-3Q5R1E6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms