Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf20Q5DTM8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Mir770-201ENSMUST00000103252 94 ntBASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf20Q5DTM8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Gm10052-201ENSMUST00000168019 960 ntBASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Gm5587-201ENSMUST00000206270 674 ntBASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Gm7729-201ENSMUST00000050143 801 ntBASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf20Q5DTM8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.29■□□□□ 0.68
Rnf20Q5DTM8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Gm44430-201ENSMUST00000203376 995 ntBASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rnf20Q5DTM8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf20Q5DTM8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.27■□□□□ 0.68
Rnf20Q5DTM8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf20Q5DTM8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Rnf20Q5DTM8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf20Q5DTM8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf20Q5DTM8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf20Q5DTM8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf20Q5DTM8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf20Q5DTM8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf20Q5DTM8 Gm6623-201ENSMUST00000173570 544 ntBASIC19.27■□□□□ 0.68
Rnf20Q5DTM8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf20Q5DTM8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf20Q5DTM8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf20Q5DTM8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms