Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Gm16061-201ENSMUST00000122167 857 ntBASIC16.06■□□□□ 0.16
Scn2bQ56A07 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Gm44450-201ENSMUST00000199528 114 ntBASIC16.06■□□□□ 0.16
Scn2bQ56A07 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn2bQ56A07 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn2bQ56A07 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Gm45058-201ENSMUST00000205810 766 ntBASIC16.05■□□□□ 0.16
Scn2bQ56A07 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn2bQ56A07 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.04■□□□□ 0.16
Scn2bQ56A07 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.04■□□□□ 0.16
Scn2bQ56A07 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn2bQ56A07 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn2bQ56A07 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.03■□□□□ 0.16
Scn2bQ56A07 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn2bQ56A07 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms