Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.68■□□□□ 0.58
Rc3h1Q4VGL6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Gm13418-201ENSMUST00000119097 944 ntBASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 AW822252-206ENSMUST00000208904 237 ntBASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rc3h1Q4VGL6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rc3h1Q4VGL6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rc3h1Q4VGL6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rc3h1Q4VGL6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rc3h1Q4VGL6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Gm18733-201ENSMUST00000173950 856 ntBASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Mir5131-201ENSMUST00000175426 93 ntBASIC18.64■□□□□ 0.57
Rc3h1Q4VGL6 Gm18195-201ENSMUST00000207604 706 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms