Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Fam196aQ3USH1 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Fam196aQ3USH1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.21■□□□□ 0.19
Fam196aQ3USH1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.21■□□□□ 0.19
Fam196aQ3USH1 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Fam196aQ3USH1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.21■□□□□ 0.19
Fam196aQ3USH1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Fam196aQ3USH1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Fam196aQ3USH1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Fam196aQ3USH1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Fam196aQ3USH1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Fam196aQ3USH1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Fam196aQ3USH1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Fam196aQ3USH1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Fam196aQ3USH1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.21■□□□□ 0.18
Fam196aQ3USH1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Fam196aQ3USH1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Fam196aQ3USH1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Fam196aQ3USH1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Fam196aQ3USH1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.21■□□□□ 0.18
Fam196aQ3USH1 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.21■□□□□ 0.18
Fam196aQ3USH1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Fam196aQ3USH1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.2■□□□□ 0.18
Fam196aQ3USH1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Gm12428-201ENSMUST00000119844 727 ntBASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Gm43767-201ENSMUST00000198933 381 ntBASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Gm45612-201ENSMUST00000211320 160 ntBASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Fam196aQ3USH1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Gm7787-201ENSMUST00000216858 688 ntBASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.19■□□□□ 0.18
Fam196aQ3USH1 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Fam196aQ3USH1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Fam196aQ3USH1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms