Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Gm28631-201ENSMUST00000190740 334 ntBASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Spg11Q3UHA3 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.9□□□□□ -0.02
Spg11Q3UHA3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 BC021767-201ENSMUST00000126387 1716 ntBASIC14.89□□□□□ -0.03
Spg11Q3UHA3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Gm9385-201ENSMUST00000117563 472 ntBASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.89□□□□□ -0.03
Spg11Q3UHA3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Syt7-205ENSMUST00000224135 1557 ntBASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Spg11Q3UHA3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Gm8602-201ENSMUST00000184045 607 ntBASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
Spg11Q3UHA3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Rpph1-201ENSMUST00000175096 319 ntBASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.87□□□□□ -0.03
Spg11Q3UHA3 AY702102-202ENSMUST00000194651 1173 ntBASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Gm6180-201ENSMUST00000065243 498 ntBASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Gm11478-201ENSMUST00000117851 599 ntBASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Gm8344-201ENSMUST00000119813 856 ntBASIC14.87□□□□□ -0.03
Spg11Q3UHA3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Spg11Q3UHA3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.87□□□□□ -0.03
Spg11Q3UHA3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Gm15693-201ENSMUST00000120470 637 ntBASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Gm24158-201ENSMUST00000175263 71 ntBASIC14.86□□□□□ -0.03
Spg11Q3UHA3 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Gm6266-201ENSMUST00000203844 806 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms