Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Gm11918-201ENSMUST00000121660 179 ntBASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Ush2AQ2QI47 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Gm12091-201ENSMUST00000146791 830 ntBASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Gm9682-201ENSMUST00000197505 556 ntBASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Mir8112-201ENSMUST00000184382 131 ntBASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Gm45203-201ENSMUST00000206384 1831 ntBASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Ush2AQ2QI47 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Gm18489-201ENSMUST00000172565 551 ntBASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Gm42466-201ENSMUST00000202099 1301 ntBASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Gm27533-201ENSMUST00000183800 152 ntBASIC8.59□□□□□ -1.03
Ush2AQ2QI47 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Gm38342-201ENSMUST00000195710 2980 ntBASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Gm37714-201ENSMUST00000194742 342 ntBASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ush2AQ2QI47 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC8.59□□□□□ -1.04
Ush2AQ2QI47 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Gm13015-201ENSMUST00000118674 204 ntBASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Gm2810-201ENSMUST00000118681 990 ntBASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Gm14767-201ENSMUST00000121559 586 ntBASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC8.58□□□□□ -1.04
Ush2AQ2QI47 Gm15358-201ENSMUST00000119249 520 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms