Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.47□□□□□ -0.09
Chd8Q09XV5 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Gm6218-201ENSMUST00000219812 628 ntBASIC14.47□□□□□ -0.09
Chd8Q09XV5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Chd8Q09XV5 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Gm15782-201ENSMUST00000121073 445 ntBASIC14.47□□□□□ -0.09
Chd8Q09XV5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Gm7593-201ENSMUST00000187246 644 ntBASIC14.47□□□□□ -0.09
Chd8Q09XV5 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chd8Q09XV5 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd8Q09XV5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd8Q09XV5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd8Q09XV5 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd8Q09XV5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Chd8Q09XV5 Gm38241-201ENSMUST00000192641 898 ntBASIC14.46□□□□□ -0.09
Chd8Q09XV5 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.46□□□□□ -0.09
Chd8Q09XV5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chd8Q09XV5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Chd8Q09XV5 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd8Q09XV5 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd8Q09XV5 Gm25144-201ENSMUST00000179561 110 ntBASIC14.46□□□□□ -0.09
Chd8Q09XV5 Gm25352-201ENSMUST00000179815 110 ntBASIC14.46□□□□□ -0.09
Chd8Q09XV5 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chd8Q09XV5 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chd8Q09XV5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd8Q09XV5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chd8Q09XV5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chd8Q09XV5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chd8Q09XV5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Chd8Q09XV5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Gm27838-201ENSMUST00000184829 128 ntBASIC14.45□□□□□ -0.1
Chd8Q09XV5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.45□□□□□ -0.1
Chd8Q09XV5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Mir1982-201ENSMUST00000157368 74 ntBASIC14.45□□□□□ -0.1
Chd8Q09XV5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Gm37424-201ENSMUST00000191727 561 ntBASIC14.45□□□□□ -0.1
Chd8Q09XV5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.45□□□□□ -0.1
Chd8Q09XV5 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.45□□□□□ -0.1
Chd8Q09XV5 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd8Q09XV5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.44□□□□□ -0.1
Chd8Q09XV5 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Mir5132-201ENSMUST00000175166 71 ntBASIC14.44□□□□□ -0.1
Chd8Q09XV5 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.44□□□□□ -0.1
Chd8Q09XV5 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd8Q09XV5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.44□□□□□ -0.1
Chd8Q09XV5 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms