Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm27000-201ENSMUST00000182943 842 ntBASIC12.54□□□□□ -0.4
Cdx4Q07424 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cdx4Q07424 Gm5587-201ENSMUST00000206270 674 ntBASIC12.54□□□□□ -0.4
Cdx4Q07424 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cdx4Q07424 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdx4Q07424 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.54□□□□□ -0.4
Cdx4Q07424 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdx4Q07424 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx4Q07424 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdx4Q07424 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdx4Q07424 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Cdx4Q07424 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdx4Q07424 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdx4Q07424 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdx4Q07424 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdx4Q07424 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdx4Q07424 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdx4Q07424 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdx4Q07424 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdx4Q07424 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Cdx4Q07424 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.52□□□□□ -0.41
Cdx4Q07424 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx4Q07424 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx4Q07424 Gm7284-201ENSMUST00000131667 944 ntBASIC12.52□□□□□ -0.41
Cdx4Q07424 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.52□□□□□ -0.41
Cdx4Q07424 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx4Q07424 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx4Q07424 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx4Q07424 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx4Q07424 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cdx4Q07424 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx4Q07424 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx4Q07424 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cdx4Q07424 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx4Q07424 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx4Q07424 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.52□□□□□ -0.41
Cdx4Q07424 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cdx4Q07424 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx4Q07424 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx4Q07424 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx4Q07424 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx4Q07424 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx4Q07424 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdx4Q07424 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.51□□□□□ -0.41
Cdx4Q07424 Gm26039-201ENSMUST00000158152 144 ntBASIC12.51□□□□□ -0.41
Cdx4Q07424 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.51□□□□□ -0.41
Cdx4Q07424 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Cdx4Q07424 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms