Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Emx1Q04742 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Emx1Q04742 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.15■□□□□ 0.02
Emx1Q04742 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Emx1Q04742 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Emx1Q04742 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Emx1Q04742 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Emx1Q04742 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Emx1Q04742 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Emx1Q04742 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Emx1Q04742 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Emx1Q04742 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Emx1Q04742 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.14■□□□□ 0.01
Emx1Q04742 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Emx1Q04742 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.14■□□□□ 0.01
Emx1Q04742 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Asic1-205ENSMUST00000228185 1818 ntBASIC15.14■□□□□ 0.01
Emx1Q04742 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Emx1Q04742 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.14■□□□□ 0.01
Emx1Q04742 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Emx1Q04742 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Emx1Q04742 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.14■□□□□ 0.01
Emx1Q04742 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Emx1Q04742 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.14■□□□□ 0.01
Emx1Q04742 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Emx1Q04742 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.13■□□□□ 0.01
Emx1Q04742 Gm6659-201ENSMUST00000174752 547 ntBASIC15.13■□□□□ 0.01
Emx1Q04742 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Emx1Q04742 Gm7889-201ENSMUST00000185591 958 ntBASIC15.13■□□□□ 0.01
Emx1Q04742 Gm21362-201ENSMUST00000194272 928 ntBASIC15.13■□□□□ 0.01
Emx1Q04742 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Emx1Q04742 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Emx1Q04742 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Emx1Q04742 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Emx1Q04742 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Emx1Q04742 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.12■□□□□ 0.01
Emx1Q04742 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.12■□□□□ 0.01
Emx1Q04742 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Emx1Q04742 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.12■□□□□ 0.01
Emx1Q04742 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.12■□□□□ 0.01
Emx1Q04742 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Emx1Q04742 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Emx1Q04742 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Emx1Q04742 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.12■□□□□ 0.01
Emx1Q04742 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Emx1Q04742 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Emx1Q04742 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.12■□□□□ 0.01
Emx1Q04742 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Emx1Q04742 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.12■□□□□ 0.01
Emx1Q04742 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Emx1Q04742 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Emx1Q04742 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Emx1Q04742 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Emx1Q04742 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Emx1Q04742 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Emx1Q04742 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.12■□□□□ 0.01
Emx1Q04742 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.12■□□□□ 0.01
Emx1Q04742 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Emx1Q04742 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Emx1Q04742 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Emx1Q04742 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Emx1Q04742 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Emx1Q04742 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Emx1Q04742 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Emx1Q04742 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Emx1Q04742 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Emx1Q04742 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Emx1Q04742 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms