Protein–RNA interactions for Protein: Q02085

Snai1, Zinc finger protein SNAI1, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snai1Q02085 Gm17968-201ENSMUST00000194902 784 ntBASIC19.69■□□□□ 0.74
Snai1Q02085 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snai1Q02085 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snai1Q02085 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Snai1Q02085 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Snai1Q02085 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snai1Q02085 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.69■□□□□ 0.74
Snai1Q02085 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snai1Q02085 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snai1Q02085 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snai1Q02085 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snai1Q02085 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snai1Q02085 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snai1Q02085 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.68■□□□□ 0.74
Snai1Q02085 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.68■□□□□ 0.74
Snai1Q02085 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.68■□□□□ 0.74
Snai1Q02085 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snai1Q02085 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snai1Q02085 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.68■□□□□ 0.74
Snai1Q02085 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.68■□□□□ 0.74
Snai1Q02085 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Snai1Q02085 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snai1Q02085 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snai1Q02085 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snai1Q02085 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.68■□□□□ 0.74
Snai1Q02085 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snai1Q02085 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Snai1Q02085 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snai1Q02085 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snai1Q02085 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Snai1Q02085 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Snai1Q02085 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snai1Q02085 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Snai1Q02085 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snai1Q02085 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Snai1Q02085 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Snai1Q02085 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.67■□□□□ 0.74
Snai1Q02085 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snai1Q02085 Gm13597-201ENSMUST00000121239 375 ntBASIC19.67■□□□□ 0.74
Snai1Q02085 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.67■□□□□ 0.74
Snai1Q02085 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.67■□□□□ 0.74
Snai1Q02085 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snai1Q02085 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Snai1Q02085 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snai1Q02085 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snai1Q02085 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
Snai1Q02085 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snai1Q02085 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snai1Q02085 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Snai1Q02085 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snai1Q02085 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Snai1Q02085 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC19.66■□□□□ 0.74
Snai1Q02085 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.66■□□□□ 0.74
Snai1Q02085 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.66■□□□□ 0.74
Snai1Q02085 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snai1Q02085 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snai1Q02085 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.66■□□□□ 0.74
Snai1Q02085 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.66■□□□□ 0.74
Snai1Q02085 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.66■□□□□ 0.74
Snai1Q02085 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snai1Q02085 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Snai1Q02085 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Snai1Q02085 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Snai1Q02085 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Snai1Q02085 Rarb-207ENSMUST00000225921 2756 ntBASIC19.66■□□□□ 0.74
Snai1Q02085 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snai1Q02085 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.65■□□□□ 0.74
Snai1Q02085 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snai1Q02085 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Snai1Q02085 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Snai1Q02085 Gm15920-201ENSMUST00000118998 402 ntBASIC19.65■□□□□ 0.74
Snai1Q02085 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snai1Q02085 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Snai1Q02085 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Snai1Q02085 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.65■□□□□ 0.74
Snai1Q02085 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Snai1Q02085 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Snai1Q02085 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snai1Q02085 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Snai1Q02085 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snai1Q02085 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snai1Q02085 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snai1Q02085 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Snai1Q02085 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Snai1Q02085 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.64■□□□□ 0.74
Snai1Q02085 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.64■□□□□ 0.74
Snai1Q02085 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.64■□□□□ 0.73
Snai1Q02085 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.64■□□□□ 0.73
Snai1Q02085 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.64■□□□□ 0.73
Snai1Q02085 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Snai1Q02085 Gm44492-201ENSMUST00000197012 141 ntBASIC19.64■□□□□ 0.73
Snai1Q02085 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.64■□□□□ 0.73
Snai1Q02085 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.64■□□□□ 0.73
Snai1Q02085 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snai1Q02085 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snai1Q02085 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.64■□□□□ 0.73
Snai1Q02085 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snai1Q02085 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Snai1Q02085 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Snai1Q02085 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms