Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.3■□□□□ 0.04
Nkx3-2P97503 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Nkx3-2P97503 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx3-2P97503 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx3-2P97503 Gm12895-201ENSMUST00000122214 226 ntBASIC15.3■□□□□ 0.04
Nkx3-2P97503 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.3■□□□□ 0.04
Nkx3-2P97503 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.3■□□□□ 0.04
Nkx3-2P97503 Gm44430-201ENSMUST00000203376 995 ntBASIC15.3■□□□□ 0.04
Nkx3-2P97503 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx3-2P97503 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.3■□□□□ 0.04
Nkx3-2P97503 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx3-2P97503 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx3-2P97503 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx3-2P97503 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx3-2P97503 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkx3-2P97503 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Rprl3-201ENSMUST00000157400 290 ntBASIC15.29■□□□□ 0.04
Nkx3-2P97503 Gm34391-201ENSMUST00000203706 907 ntBASIC15.29■□□□□ 0.04
Nkx3-2P97503 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx3-2P97503 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.28■□□□□ 0.04
Nkx3-2P97503 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.28■□□□□ 0.04
Nkx3-2P97503 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx3-2P97503 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx3-2P97503 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx3-2P97503 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Nkx3-2P97503 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.27■□□□□ 0.04
Nkx3-2P97503 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx3-2P97503 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nkx3-2P97503 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Nkx3-2P97503 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx3-2P97503 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx3-2P97503 Gm10052-201ENSMUST00000168019 960 ntBASIC15.27■□□□□ 0.04
Nkx3-2P97503 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx3-2P97503 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
Nkx3-2P97503 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.27■□□□□ 0.04
Nkx3-2P97503 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx3-2P97503 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx3-2P97503 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.27■□□□□ 0.04
Nkx3-2P97503 Gm7729-201ENSMUST00000050143 801 ntBASIC15.27■□□□□ 0.04
Nkx3-2P97503 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx3-2P97503 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.27■□□□□ 0.03
Nkx3-2P97503 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Nkx3-2P97503 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx3-2P97503 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms