Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-3P97334 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-3P97334 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-3P97334 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-3P97334 Gm27300-201ENSMUST00000184085 97 ntBASIC20.35■□□□□ 0.85
Nkx2-3P97334 Gm27335-201ENSMUST00000184758 97 ntBASIC20.35■□□□□ 0.85
Nkx2-3P97334 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.35■□□□□ 0.85
Nkx2-3P97334 Gm2213-201ENSMUST00000197485 688 ntBASIC20.35■□□□□ 0.85
Nkx2-3P97334 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-3P97334 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-3P97334 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Nkx2-3P97334 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-3P97334 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Nkx2-3P97334 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-3P97334 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-3P97334 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.34■□□□□ 0.85
Nkx2-3P97334 Grk6-207ENSMUST00000225925 2769 ntBASIC20.34■□□□□ 0.85
Nkx2-3P97334 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-3P97334 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.34■□□□□ 0.85
Nkx2-3P97334 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-3P97334 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-3P97334 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-3P97334 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-3P97334 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-3P97334 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nkx2-3P97334 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-3P97334 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx2-3P97334 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nkx2-3P97334 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nkx2-3P97334 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nkx2-3P97334 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nkx2-3P97334 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.32■□□□□ 0.84
Nkx2-3P97334 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.32■□□□□ 0.84
Nkx2-3P97334 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx2-3P97334 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-3P97334 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-3P97334 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Gm11764-201ENSMUST00000120221 623 ntBASIC20.31■□□□□ 0.84
Nkx2-3P97334 Gm13597-201ENSMUST00000121239 375 ntBASIC20.31■□□□□ 0.84
Nkx2-3P97334 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Gm6736-201ENSMUST00000166583 948 ntBASIC20.31■□□□□ 0.84
Nkx2-3P97334 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC20.31■□□□□ 0.84
Nkx2-3P97334 AC093926.2-201ENSMUST00000214468 1228 ntBASIC20.31■□□□□ 0.84
Nkx2-3P97334 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Nkx2-3P97334 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-3P97334 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.3■□□□□ 0.84
Nkx2-3P97334 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms