Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SgcbP82349 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.46□□□□□ -0.1
SgcbP82349 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SgcbP82349 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SgcbP82349 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.46□□□□□ -0.1
SgcbP82349 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SgcbP82349 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.45□□□□□ -0.1
SgcbP82349 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.45□□□□□ -0.1
SgcbP82349 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SgcbP82349 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SgcbP82349 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.45□□□□□ -0.1
SgcbP82349 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Gm9103-201ENSMUST00000119371 405 ntBASIC14.45□□□□□ -0.1
SgcbP82349 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.45□□□□□ -0.1
SgcbP82349 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SgcbP82349 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.45□□□□□ -0.1
SgcbP82349 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SgcbP82349 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
SgcbP82349 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.45□□□□□ -0.1
SgcbP82349 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.45□□□□□ -0.1
SgcbP82349 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SgcbP82349 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.44□□□□□ -0.1
SgcbP82349 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SgcbP82349 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SgcbP82349 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SgcbP82349 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SgcbP82349 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SgcbP82349 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SgcbP82349 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.44□□□□□ -0.1
SgcbP82349 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SgcbP82349 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SgcbP82349 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SgcbP82349 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SgcbP82349 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SgcbP82349 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SgcbP82349 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SgcbP82349 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SgcbP82349 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SgcbP82349 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SgcbP82349 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SgcbP82349 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SgcbP82349 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.43□□□□□ -0.1
SgcbP82349 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SgcbP82349 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcbP82349 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcbP82349 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.43□□□□□ -0.1
SgcbP82349 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.43□□□□□ -0.1
SgcbP82349 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SgcbP82349 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SgcbP82349 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcbP82349 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SgcbP82349 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcbP82349 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.43□□□□□ -0.1
SgcbP82349 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcbP82349 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcbP82349 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcbP82349 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.43□□□□□ -0.1
SgcbP82349 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SgcbP82349 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcbP82349 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcbP82349 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcbP82349 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SgcbP82349 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SgcbP82349 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.42□□□□□ -0.1
SgcbP82349 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.42□□□□□ -0.1
SgcbP82349 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 Gm18669-201ENSMUST00000216049 778 ntBASIC14.42□□□□□ -0.1
SgcbP82349 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.42□□□□□ -0.1
SgcbP82349 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SgcbP82349 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SgcbP82349 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms