Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Mir770-201ENSMUST00000103252 94 ntBASIC13.5□□□□□ -0.25
Pdlim4P70271 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pdlim4P70271 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Pdlim4P70271 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.5□□□□□ -0.25
Pdlim4P70271 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.5□□□□□ -0.25
Pdlim4P70271 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim4P70271 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pdlim4P70271 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim4P70271 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim4P70271 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim4P70271 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Pdlim4P70271 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim4P70271 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pdlim4P70271 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.49□□□□□ -0.25
Pdlim4P70271 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.49□□□□□ -0.25
Pdlim4P70271 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.49□□□□□ -0.25
Pdlim4P70271 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Pdlim4P70271 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pdlim4P70271 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.49□□□□□ -0.25
Pdlim4P70271 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Pdlim4P70271 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.49□□□□□ -0.25
Pdlim4P70271 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim4P70271 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Pdlim4P70271 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.48□□□□□ -0.25
Pdlim4P70271 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.48□□□□□ -0.25
Pdlim4P70271 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Gm6345-202ENSMUST00000180900 204 ntBASIC13.48□□□□□ -0.25
Pdlim4P70271 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pdlim4P70271 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pdlim4P70271 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pdlim4P70271 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.48□□□□□ -0.25
Pdlim4P70271 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.48□□□□□ -0.25
Pdlim4P70271 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim4P70271 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Pdlim4P70271 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim4P70271 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim4P70271 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pdlim4P70271 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim4P70271 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim4P70271 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim4P70271 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pdlim4P70271 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Pdlim4P70271 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms