Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Six5P70178 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Six5P70178 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Six5P70178 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.17■□□□□ 0.02
Six5P70178 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.17■□□□□ 0.02
Six5P70178 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Six5P70178 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Six5P70178 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.17■□□□□ 0.02
Six5P70178 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Six5P70178 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Six5P70178 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Six5P70178 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Six5P70178 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Six5P70178 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.16■□□□□ 0.02
Six5P70178 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.16■□□□□ 0.02
Six5P70178 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.16■□□□□ 0.02
Six5P70178 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Six5P70178 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Six5P70178 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.16■□□□□ 0.02
Six5P70178 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Six5P70178 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Six5P70178 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.15■□□□□ 0.02
Six5P70178 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Six5P70178 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Six5P70178 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Six5P70178 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Six5P70178 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Six5P70178 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms