Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm3P62311 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm3P62311 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm3P62311 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm3P62311 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm3P62311 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Lsm3P62311 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm3P62311 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Lsm3P62311 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm3P62311 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Lsm3P62311 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.86□□□□□ -0.03
Lsm3P62311 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Gm6576-201ENSMUST00000169678 883 ntBASIC14.86□□□□□ -0.03
Lsm3P62311 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.86□□□□□ -0.03
Lsm3P62311 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Lsm3P62311 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.86□□□□□ -0.03
Lsm3P62311 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Lsm3P62311 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm3P62311 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lsm3P62311 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lsm3P62311 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.85□□□□□ -0.03
Lsm3P62311 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.85□□□□□ -0.03
Lsm3P62311 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lsm3P62311 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Lsm3P62311 Flg-201ENSMUST00000050758 1488 ntBASIC14.85□□□□□ -0.03
Lsm3P62311 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.85□□□□□ -0.03
Lsm3P62311 Gm11643-201ENSMUST00000119578 864 ntBASIC14.85□□□□□ -0.03
Lsm3P62311 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lsm3P62311 Mtag2-201ENSMUST00000058665 714 ntBASIC14.85□□□□□ -0.03
Lsm3P62311 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Lsm3P62311 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Lsm3P62311 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.85□□□□□ -0.03
Lsm3P62311 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lsm3P62311 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lsm3P62311 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.85□□□□□ -0.03
Lsm3P62311 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.84□□□□□ -0.03
Lsm3P62311 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.84□□□□□ -0.03
Lsm3P62311 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.84□□□□□ -0.03
Lsm3P62311 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.84□□□□□ -0.03
Lsm3P62311 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.84□□□□□ -0.03
Lsm3P62311 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Lsm3P62311 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Lsm3P62311 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.84□□□□□ -0.03
Lsm3P62311 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Lsm3P62311 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Lsm3P62311 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm3P62311 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lsm3P62311 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms