Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.31□□□□□ -0.12
Sec61a1P61620 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Sec61a1P61620 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.31□□□□□ -0.12
Sec61a1P61620 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sec61a1P61620 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Sec61a1P61620 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.31□□□□□ -0.12
Sec61a1P61620 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sec61a1P61620 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a1P61620 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sec61a1P61620 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sec61a1P61620 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.3□□□□□ -0.12
Sec61a1P61620 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.3□□□□□ -0.12
Sec61a1P61620 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Sec61a1P61620 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.3□□□□□ -0.12
Sec61a1P61620 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sec61a1P61620 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sec61a1P61620 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.3□□□□□ -0.12
Sec61a1P61620 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.3□□□□□ -0.12
Sec61a1P61620 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a1P61620 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sec61a1P61620 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.29□□□□□ -0.12
Sec61a1P61620 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a1P61620 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a1P61620 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Sec61a1P61620 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a1P61620 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.29□□□□□ -0.12
Sec61a1P61620 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sec61a1P61620 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a1P61620 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a1P61620 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a1P61620 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a1P61620 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.29□□□□□ -0.12
Sec61a1P61620 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a1P61620 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a1P61620 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a1P61620 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a1P61620 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sec61a1P61620 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a1P61620 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a1P61620 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a1P61620 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a1P61620 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.29□□□□□ -0.12
Sec61a1P61620 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sec61a1P61620 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.29□□□□□ -0.12
Sec61a1P61620 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a1P61620 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.28□□□□□ -0.12
Sec61a1P61620 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Sec61a1P61620 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.28□□□□□ -0.12
Sec61a1P61620 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Gm7791-201ENSMUST00000219066 539 ntBASIC14.28□□□□□ -0.12
Sec61a1P61620 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sec61a1P61620 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms