Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Sssca1P56873 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.13□□□□□ -0.31
Sssca1P56873 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.13□□□□□ -0.31
Sssca1P56873 Gm12527-201ENSMUST00000117967 564 ntBASIC13.13□□□□□ -0.31
Sssca1P56873 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.13□□□□□ -0.31
Sssca1P56873 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.13□□□□□ -0.31
Sssca1P56873 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.13□□□□□ -0.31
Sssca1P56873 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sssca1P56873 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sssca1P56873 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.13□□□□□ -0.31
Sssca1P56873 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sssca1P56873 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Sssca1P56873 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Sssca1P56873 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.12□□□□□ -0.31
Sssca1P56873 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sssca1P56873 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.12□□□□□ -0.31
Sssca1P56873 Gm7791-201ENSMUST00000219066 539 ntBASIC13.12□□□□□ -0.31
Sssca1P56873 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Sssca1P56873 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sssca1P56873 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Sssca1P56873 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.12□□□□□ -0.31
Sssca1P56873 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.12□□□□□ -0.31
Sssca1P56873 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sssca1P56873 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sssca1P56873 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sssca1P56873 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sssca1P56873 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.11□□□□□ -0.31
Sssca1P56873 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sssca1P56873 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sssca1P56873 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Sssca1P56873 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sssca1P56873 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sssca1P56873 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms