Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Cdh5P55284 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cdh5P55284 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.82■□□□□ 0.12
Cdh5P55284 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.82■□□□□ 0.12
Cdh5P55284 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cdh5P55284 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.82■□□□□ 0.12
Cdh5P55284 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.82■□□□□ 0.12
Cdh5P55284 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cdh5P55284 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Cdh5P55284 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh5P55284 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh5P55284 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh5P55284 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh5P55284 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh5P55284 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh5P55284 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.81■□□□□ 0.12
Cdh5P55284 Gm16061-201ENSMUST00000122167 857 ntBASIC15.81■□□□□ 0.12
Cdh5P55284 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh5P55284 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh5P55284 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh5P55284 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh5P55284 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.81■□□□□ 0.12
Cdh5P55284 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh5P55284 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.81■□□□□ 0.12
Cdh5P55284 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.81■□□□□ 0.12
Cdh5P55284 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh5P55284 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.81■□□□□ 0.12
Cdh5P55284 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cdh5P55284 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Cdh5P55284 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh5P55284 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Cdh5P55284 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh5P55284 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh5P55284 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh5P55284 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cdh5P55284 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh5P55284 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.8■□□□□ 0.12
Cdh5P55284 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh5P55284 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.8■□□□□ 0.12
Cdh5P55284 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Cdh5P55284 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh5P55284 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cdh5P55284 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh5P55284 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh5P55284 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.8■□□□□ 0.12
Cdh5P55284 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Cdh5P55284 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh5P55284 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh5P55284 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cdh5P55284 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.79■□□□□ 0.12
Cdh5P55284 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh5P55284 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh5P55284 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh5P55284 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh5P55284 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh5P55284 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cdh5P55284 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cdh5P55284 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh5P55284 Gm10013-201ENSMUST00000106074 672 ntBASIC15.79■□□□□ 0.12
Cdh5P55284 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh5P55284 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.79■□□□□ 0.12
Cdh5P55284 Gm17661-201ENSMUST00000170317 270 ntBASIC15.79■□□□□ 0.12
Cdh5P55284 Gm22697-201ENSMUST00000175194 63 ntBASIC15.79■□□□□ 0.12
Cdh5P55284 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh5P55284 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.79■□□□□ 0.12
Cdh5P55284 Gm18101-201ENSMUST00000215769 548 ntBASIC15.79■□□□□ 0.12
Cdh5P55284 Il3ra-202ENSMUST00000223589 738 ntBASIC15.79■□□□□ 0.12
Cdh5P55284 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh5P55284 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh5P55284 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.79■□□□□ 0.12
Cdh5P55284 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh5P55284 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh5P55284 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh5P55284 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh5P55284 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh5P55284 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cdh5P55284 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh5P55284 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cdh5P55284 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh5P55284 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh5P55284 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms