Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.52■□□□□ 0.24
Sox1P53783 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Sox1P53783 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox1P53783 Gm18889-201ENSMUST00000174284 929 ntBASIC16.52■□□□□ 0.24
Sox1P53783 Gm18187-201ENSMUST00000196476 984 ntBASIC16.52■□□□□ 0.24
Sox1P53783 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.52■□□□□ 0.24
Sox1P53783 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.52■□□□□ 0.24
Sox1P53783 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox1P53783 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox1P53783 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox1P53783 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox1P53783 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Sox1P53783 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox1P53783 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Sox1P53783 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sox1P53783 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox1P53783 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sox1P53783 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox1P53783 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox1P53783 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox1P53783 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Sox1P53783 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox1P53783 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox1P53783 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox1P53783 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox1P53783 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sox1P53783 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox1P53783 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox1P53783 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox1P53783 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.51■□□□□ 0.23
Sox1P53783 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.51■□□□□ 0.23
Sox1P53783 Gm25406-201ENSMUST00000157599 105 ntBASIC16.51■□□□□ 0.23
Sox1P53783 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox1P53783 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.51■□□□□ 0.23
Sox1P53783 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox1P53783 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox1P53783 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox1P53783 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox1P53783 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox1P53783 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.51■□□□□ 0.23
Sox1P53783 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox1P53783 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Sox1P53783 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox1P53783 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox1P53783 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox1P53783 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sox1P53783 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.5■□□□□ 0.23
Sox1P53783 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox1P53783 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Sox1P53783 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sox1P53783 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox1P53783 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.5■□□□□ 0.23
Sox1P53783 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox1P53783 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sox1P53783 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.5■□□□□ 0.23
Sox1P53783 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sox1P53783 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.5■□□□□ 0.23
Sox1P53783 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sox1P53783 Gm37153-201ENSMUST00000193637 231 ntBASIC16.5■□□□□ 0.23
Sox1P53783 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sox1P53783 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.5■□□□□ 0.23
Sox1P53783 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox1P53783 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Sox1P53783 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox1P53783 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox1P53783 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Sox1P53783 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sox1P53783 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox1P53783 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox1P53783 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox1P53783 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox1P53783 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox1P53783 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox1P53783 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox1P53783 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.49■□□□□ 0.23
Sox1P53783 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.49■□□□□ 0.23
Sox1P53783 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.49■□□□□ 0.23
Sox1P53783 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox1P53783 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.49■□□□□ 0.23
Sox1P53783 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox1P53783 Gm7774-201ENSMUST00000200064 533 ntBASIC16.49■□□□□ 0.23
Sox1P53783 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.49■□□□□ 0.23
Sox1P53783 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.49■□□□□ 0.23
Sox1P53783 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.49■□□□□ 0.23
Sox1P53783 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox1P53783 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox1P53783 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox1P53783 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox1P53783 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Sox1P53783 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox1P53783 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox1P53783 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.49■□□□□ 0.23
Sox1P53783 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Sox1P53783 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Sox1P53783 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox1P53783 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox1P53783 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox1P53783 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox1P53783 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox1P53783 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms