Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Brca1P48754 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Brca1P48754 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Brca1P48754 Gm5177-201ENSMUST00000183092 997 ntBASIC18.1■□□□□ 0.49
Brca1P48754 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Brca1P48754 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Brca1P48754 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Brca1P48754 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.1■□□□□ 0.49
Brca1P48754 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Brca1P48754 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Brca1P48754 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Brca1P48754 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Brca1P48754 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Brca1P48754 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Brca1P48754 Gm13216-201ENSMUST00000117145 591 ntBASIC18.09■□□□□ 0.49
Brca1P48754 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Brca1P48754 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Brca1P48754 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Brca1P48754 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Brca1P48754 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Brca1P48754 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Brca1P48754 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.09■□□□□ 0.49
Brca1P48754 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.09■□□□□ 0.49
Brca1P48754 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Brca1P48754 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Brca1P48754 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Brca1P48754 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Brca1P48754 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Brca1P48754 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Brca1P48754 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Brca1P48754 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Brca1P48754 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Brca1P48754 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.08■□□□□ 0.48
Brca1P48754 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Brca1P48754 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Brca1P48754 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Brca1P48754 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Brca1P48754 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Brca1P48754 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Brca1P48754 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Brca1P48754 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.07■□□□□ 0.48
Brca1P48754 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 Gm15358-201ENSMUST00000119249 520 ntBASIC18.07■□□□□ 0.48
Brca1P48754 Gm11424-201ENSMUST00000121929 829 ntBASIC18.07■□□□□ 0.48
Brca1P48754 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.07■□□□□ 0.48
Brca1P48754 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 Gm27622-201ENSMUST00000183779 60 ntBASIC18.07■□□□□ 0.48
Brca1P48754 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Brca1P48754 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.07■□□□□ 0.48
Brca1P48754 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.07■□□□□ 0.48
Brca1P48754 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Brca1P48754 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Brca1P48754 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Brca1P48754 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Brca1P48754 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.06■□□□□ 0.48
Brca1P48754 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.06■□□□□ 0.48
Brca1P48754 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Brca1P48754 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.06■□□□□ 0.48
Brca1P48754 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.06■□□□□ 0.48
Brca1P48754 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.06■□□□□ 0.48
Brca1P48754 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Brca1P48754 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Brca1P48754 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.06■□□□□ 0.48
Brca1P48754 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Brca1P48754 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.06■□□□□ 0.48
Brca1P48754 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.06■□□□□ 0.48
Brca1P48754 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.06■□□□□ 0.48
Brca1P48754 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Brca1P48754 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Brca1P48754 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.06■□□□□ 0.48
Brca1P48754 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Brca1P48754 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Brca1P48754 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Brca1P48754 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Brca1P48754 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.05■□□□□ 0.48
Brca1P48754 Gm5745-201ENSMUST00000183748 313 ntBASIC18.05■□□□□ 0.48
Brca1P48754 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.05■□□□□ 0.48
Brca1P48754 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.05■□□□□ 0.48
Brca1P48754 Gm43474-201ENSMUST00000196415 774 ntBASIC18.05■□□□□ 0.48
Brca1P48754 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Brca1P48754 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Brca1P48754 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Brca1P48754 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Brca1P48754 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Brca1P48754 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Brca1P48754 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms