Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps4bP46467 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps4bP46467 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vps4bP46467 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Vps4bP46467 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.46■□□□□ 0.23
Vps4bP46467 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps4bP46467 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps4bP46467 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps4bP46467 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vps4bP46467 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps4bP46467 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps4bP46467 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Vps4bP46467 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.46■□□□□ 0.23
Vps4bP46467 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps4bP46467 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vps4bP46467 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Vps4bP46467 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps4bP46467 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.46■□□□□ 0.23
Vps4bP46467 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.46■□□□□ 0.23
Vps4bP46467 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps4bP46467 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps4bP46467 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps4bP46467 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps4bP46467 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps4bP46467 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vps4bP46467 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Vps4bP46467 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vps4bP46467 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Vps4bP46467 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Vps4bP46467 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.45■□□□□ 0.22
Vps4bP46467 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.45■□□□□ 0.22
Vps4bP46467 Gm13436-201ENSMUST00000120418 567 ntBASIC16.45■□□□□ 0.22
Vps4bP46467 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Vps4bP46467 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.45■□□□□ 0.22
Vps4bP46467 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.45■□□□□ 0.22
Vps4bP46467 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.45■□□□□ 0.22
Vps4bP46467 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vps4bP46467 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.45■□□□□ 0.22
Vps4bP46467 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps4bP46467 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps4bP46467 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps4bP46467 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps4bP46467 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps4bP46467 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps4bP46467 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps4bP46467 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps4bP46467 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.44■□□□□ 0.22
Vps4bP46467 Mir1668-201ENSMUST00000184114 107 ntBASIC16.44■□□□□ 0.22
Vps4bP46467 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Vps4bP46467 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps4bP46467 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps4bP46467 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vps4bP46467 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Vps4bP46467 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vps4bP46467 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Vps4bP46467 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps4bP46467 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps4bP46467 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps4bP46467 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps4bP46467 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps4bP46467 Gm36967-201ENSMUST00000193814 266 ntBASIC16.43■□□□□ 0.22
Vps4bP46467 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.43■□□□□ 0.22
Vps4bP46467 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps4bP46467 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps4bP46467 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Vps4bP46467 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps4bP46467 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps4bP46467 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps4bP46467 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps4bP46467 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Vps4bP46467 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps4bP46467 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vps4bP46467 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vps4bP46467 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Vps4bP46467 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.42■□□□□ 0.22
Vps4bP46467 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Vps4bP46467 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Vps4bP46467 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4bP46467 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.42■□□□□ 0.22
Vps4bP46467 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps4bP46467 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms