Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm11780-201ENSMUST00000136880 516 ntBASIC15.51■□□□□ 0.07
Sox18P43680 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.51■□□□□ 0.07
Sox18P43680 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.51■□□□□ 0.07
Sox18P43680 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.51■□□□□ 0.07
Sox18P43680 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.51■□□□□ 0.07
Sox18P43680 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Sox18P43680 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Sox18P43680 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Sox18P43680 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox18P43680 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox18P43680 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sox18P43680 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.5■□□□□ 0.07
Sox18P43680 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Sox18P43680 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sox18P43680 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Sox18P43680 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sox18P43680 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Sox18P43680 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox18P43680 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.5■□□□□ 0.07
Sox18P43680 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox18P43680 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox18P43680 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox18P43680 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox18P43680 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sox18P43680 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sox18P43680 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox18P43680 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox18P43680 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox18P43680 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Sox18P43680 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Gm12497-201ENSMUST00000138778 237 ntBASIC15.49■□□□□ 0.07
Sox18P43680 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.49■□□□□ 0.07
Sox18P43680 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.49■□□□□ 0.07
Sox18P43680 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.49■□□□□ 0.07
Sox18P43680 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.49■□□□□ 0.07
Sox18P43680 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.49■□□□□ 0.07
Sox18P43680 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Sox18P43680 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Sox18P43680 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox18P43680 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sox18P43680 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sox18P43680 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sox18P43680 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sox18P43680 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.48■□□□□ 0.07
Sox18P43680 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sox18P43680 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Sox18P43680 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.48■□□□□ 0.07
Sox18P43680 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sox18P43680 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC15.48■□□□□ 0.07
Sox18P43680 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.48■□□□□ 0.07
Sox18P43680 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sox18P43680 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sox18P43680 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.47■□□□□ 0.07
Sox18P43680 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.47■□□□□ 0.07
Sox18P43680 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Sox18P43680 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.47■□□□□ 0.07
Sox18P43680 Mir6956-201ENSMUST00000183598 62 ntBASIC15.47■□□□□ 0.07
Sox18P43680 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.47■□□□□ 0.07
Sox18P43680 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.47■□□□□ 0.07
Sox18P43680 Gm43438-201ENSMUST00000198133 379 ntBASIC15.47■□□□□ 0.07
Sox18P43680 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.47■□□□□ 0.07
Sox18P43680 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Sox18P43680 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.47■□□□□ 0.07
Sox18P43680 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms