Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc2P43407 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc2P43407 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sdc2P43407 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc2P43407 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.21■□□□□ 0.51
Sdc2P43407 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc2P43407 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc2P43407 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc2P43407 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc2P43407 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc2P43407 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc2P43407 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc2P43407 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Sdc2P43407 Gm13559-201ENSMUST00000120476 863 ntBASIC18.21■□□□□ 0.51
Sdc2P43407 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.21■□□□□ 0.51
Sdc2P43407 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.21■□□□□ 0.51
Sdc2P43407 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc2P43407 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc2P43407 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc2P43407 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc2P43407 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc2P43407 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Sdc2P43407 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Sdc2P43407 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Sdc2P43407 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc2P43407 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc2P43407 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.2■□□□□ 0.5
Sdc2P43407 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Sdc2P43407 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc2P43407 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc2P43407 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc2P43407 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc2P43407 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.2■□□□□ 0.5
Sdc2P43407 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc2P43407 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc2P43407 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc2P43407 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc2P43407 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc2P43407 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.2■□□□□ 0.5
Sdc2P43407 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc2P43407 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc2P43407 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc2P43407 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc2P43407 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc2P43407 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.19■□□□□ 0.5
Sdc2P43407 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.19■□□□□ 0.5
Sdc2P43407 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc2P43407 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc2P43407 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sdc2P43407 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc2P43407 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc2P43407 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc2P43407 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc2P43407 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc2P43407 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc2P43407 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.18■□□□□ 0.5
Sdc2P43407 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Sdc2P43407 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc2P43407 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc2P43407 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc2P43407 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.18■□□□□ 0.5
Sdc2P43407 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc2P43407 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.18■□□□□ 0.5
Sdc2P43407 Gm29707-201ENSMUST00000196325 491 ntBASIC18.18■□□□□ 0.5
Sdc2P43407 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc2P43407 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc2P43407 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc2P43407 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc2P43407 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sdc2P43407 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc2P43407 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc2P43407 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc2P43407 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sdc2P43407 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc2P43407 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc2P43407 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc2P43407 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc2P43407 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc2P43407 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc2P43407 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.17■□□□□ 0.5
Sdc2P43407 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc2P43407 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc2P43407 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc2P43407 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc2P43407 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc2P43407 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc2P43407 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc2P43407 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sdc2P43407 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sdc2P43407 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
Sdc2P43407 Gm26039-201ENSMUST00000158152 144 ntBASIC18.16■□□□□ 0.5
Sdc2P43407 Mir5130-201ENSMUST00000175160 84 ntBASIC18.16■□□□□ 0.5
Sdc2P43407 Gm36967-201ENSMUST00000193814 266 ntBASIC18.16■□□□□ 0.5
Sdc2P43407 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.16■□□□□ 0.5
Sdc2P43407 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sdc2P43407 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sdc2P43407 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sdc2P43407 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sdc2P43407 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sdc2P43407 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms