Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox5P35710 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox5P35710 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox5P35710 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox5P35710 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sox5P35710 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sox5P35710 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.72■□□□□ 0.43
Sox5P35710 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sox5P35710 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox5P35710 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox5P35710 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox5P35710 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sox5P35710 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox5P35710 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox5P35710 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox5P35710 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.71■□□□□ 0.43
Sox5P35710 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.71■□□□□ 0.43
Sox5P35710 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.71■□□□□ 0.43
Sox5P35710 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.71■□□□□ 0.43
Sox5P35710 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.71■□□□□ 0.43
Sox5P35710 Gm10566-201ENSMUST00000086739 996 ntBASIC17.71■□□□□ 0.43
Sox5P35710 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sox5P35710 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox5P35710 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.71■□□□□ 0.42
Sox5P35710 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sox5P35710 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sox5P35710 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sox5P35710 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.7■□□□□ 0.42
Sox5P35710 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox5P35710 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sox5P35710 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox5P35710 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sox5P35710 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sox5P35710 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox5P35710 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox5P35710 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox5P35710 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox5P35710 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.7■□□□□ 0.42
Sox5P35710 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.7■□□□□ 0.42
Sox5P35710 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.7■□□□□ 0.42
Sox5P35710 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.7■□□□□ 0.42
Sox5P35710 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox5P35710 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.7■□□□□ 0.42
Sox5P35710 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox5P35710 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox5P35710 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sox5P35710 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox5P35710 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Sox5P35710 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox5P35710 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.69■□□□□ 0.42
Sox5P35710 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.69■□□□□ 0.42
Sox5P35710 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox5P35710 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox5P35710 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox5P35710 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox5P35710 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.69■□□□□ 0.42
Sox5P35710 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.69■□□□□ 0.42
Sox5P35710 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox5P35710 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox5P35710 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox5P35710 Gm11336-201ENSMUST00000118168 334 ntBASIC17.69■□□□□ 0.42
Sox5P35710 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox5P35710 Gm29707-201ENSMUST00000196325 491 ntBASIC17.69■□□□□ 0.42
Sox5P35710 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox5P35710 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox5P35710 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox5P35710 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox5P35710 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox5P35710 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox5P35710 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox5P35710 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms