Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.41■□□□□ 0.06
Slc6a11P31650 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a11P31650 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a11P31650 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a11P31650 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Slc6a11P31650 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a11P31650 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a11P31650 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a11P31650 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Slc6a11P31650 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Slc6a11P31650 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Slc6a11P31650 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.4■□□□□ 0.06
Slc6a11P31650 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.4■□□□□ 0.06
Slc6a11P31650 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Slc6a11P31650 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Slc6a11P31650 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Slc6a11P31650 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a11P31650 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Slc6a11P31650 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.39■□□□□ 0.05
Slc6a11P31650 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Slc6a11P31650 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Slc6a11P31650 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.39■□□□□ 0.05
Slc6a11P31650 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Slc6a11P31650 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.39■□□□□ 0.05
Slc6a11P31650 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Slc6a11P31650 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.39■□□□□ 0.05
Slc6a11P31650 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a11P31650 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Slc6a11P31650 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.38■□□□□ 0.05
Slc6a11P31650 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Slc6a11P31650 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Slc6a11P31650 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a11P31650 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a11P31650 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Slc6a11P31650 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a11P31650 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a11P31650 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a11P31650 Gm7791-201ENSMUST00000219066 539 ntBASIC15.38■□□□□ 0.05
Slc6a11P31650 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a11P31650 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a11P31650 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Slc6a11P31650 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a11P31650 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a11P31650 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Slc6a11P31650 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Slc6a11P31650 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Slc6a11P31650 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a11P31650 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a11P31650 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a11P31650 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a11P31650 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a11P31650 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a11P31650 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a11P31650 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a11P31650 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Slc6a11P31650 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.37■□□□□ 0.05
Slc6a11P31650 Gm17971-201ENSMUST00000190239 806 ntBASIC15.37■□□□□ 0.05
Slc6a11P31650 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a11P31650 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.37■□□□□ 0.05
Slc6a11P31650 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a11P31650 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms