Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.59■□□□□ 0.57
Vcam1P29533 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Vcam1P29533 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Vcam1P29533 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vcam1P29533 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vcam1P29533 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Vcam1P29533 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vcam1P29533 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.58■□□□□ 0.56
Vcam1P29533 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.58■□□□□ 0.56
Vcam1P29533 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.58■□□□□ 0.56
Vcam1P29533 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vcam1P29533 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.58■□□□□ 0.56
Vcam1P29533 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vcam1P29533 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vcam1P29533 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Vcam1P29533 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vcam1P29533 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.58■□□□□ 0.56
Vcam1P29533 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Vcam1P29533 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.58■□□□□ 0.56
Vcam1P29533 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vcam1P29533 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Vcam1P29533 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Vcam1P29533 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vcam1P29533 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Vcam1P29533 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Vcam1P29533 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.57■□□□□ 0.56
Vcam1P29533 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.57■□□□□ 0.56
Vcam1P29533 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Vcam1P29533 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.57■□□□□ 0.56
Vcam1P29533 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Vcam1P29533 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vcam1P29533 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vcam1P29533 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vcam1P29533 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vcam1P29533 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vcam1P29533 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Vcam1P29533 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vcam1P29533 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Vcam1P29533 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Vcam1P29533 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vcam1P29533 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vcam1P29533 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vcam1P29533 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vcam1P29533 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.56■□□□□ 0.56
Vcam1P29533 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Vcam1P29533 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Vcam1P29533 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Vcam1P29533 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vcam1P29533 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcam1P29533 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcam1P29533 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vcam1P29533 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
Vcam1P29533 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcam1P29533 Gm4995-201ENSMUST00000117247 432 ntBASIC18.55■□□□□ 0.56
Vcam1P29533 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Vcam1P29533 Gm12260-201ENSMUST00000122447 411 ntBASIC18.55■□□□□ 0.56
Vcam1P29533 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.55■□□□□ 0.56
Vcam1P29533 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Vcam1P29533 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.55■□□□□ 0.56
Vcam1P29533 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.55■□□□□ 0.56
Vcam1P29533 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.55■□□□□ 0.56
Vcam1P29533 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcam1P29533 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vcam1P29533 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcam1P29533 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vcam1P29533 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Vcam1P29533 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcam1P29533 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Vcam1P29533 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcam1P29533 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.55■□□□□ 0.56
Vcam1P29533 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcam1P29533 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vcam1P29533 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcam1P29533 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcam1P29533 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vcam1P29533 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vcam1P29533 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcam1P29533 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcam1P29533 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vcam1P29533 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Vcam1P29533 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms