Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
H2afxP27661 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
H2afxP27661 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.02■□□□□ 0.32
H2afxP27661 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
H2afxP27661 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afxP27661 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afxP27661 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afxP27661 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.02■□□□□ 0.32
H2afxP27661 Gm24841-201ENSMUST00000158676 357 ntBASIC17.02■□□□□ 0.32
H2afxP27661 Gm4974-201ENSMUST00000209974 875 ntBASIC17.02■□□□□ 0.32
H2afxP27661 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afxP27661 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.02■□□□□ 0.32
H2afxP27661 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afxP27661 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afxP27661 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afxP27661 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afxP27661 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afxP27661 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
H2afxP27661 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afxP27661 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afxP27661 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afxP27661 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
H2afxP27661 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.31
H2afxP27661 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.02■□□□□ 0.31
H2afxP27661 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
H2afxP27661 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afxP27661 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afxP27661 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
H2afxP27661 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afxP27661 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
H2afxP27661 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
H2afxP27661 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
H2afxP27661 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afxP27661 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afxP27661 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
H2afxP27661 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
H2afxP27661 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.01■□□□□ 0.31
H2afxP27661 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afxP27661 Gm5408-201ENSMUST00000197998 747 ntBASIC17.01■□□□□ 0.31
H2afxP27661 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afxP27661 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
H2afxP27661 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.01■□□□□ 0.31
H2afxP27661 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
H2afxP27661 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
H2afxP27661 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
H2afxP27661 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afxP27661 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afxP27661 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afxP27661 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
H2afxP27661 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afxP27661 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afxP27661 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17■□□□□ 0.31
H2afxP27661 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17■□□□□ 0.31
H2afxP27661 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Gm5297-201ENSMUST00000198555 1171 ntBASIC17■□□□□ 0.31
H2afxP27661 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17■□□□□ 0.31
H2afxP27661 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17■□□□□ 0.31
H2afxP27661 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17■□□□□ 0.31
H2afxP27661 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
H2afxP27661 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17■□□□□ 0.31
H2afxP27661 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
H2afxP27661 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.99■□□□□ 0.31
H2afxP27661 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afxP27661 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.99■□□□□ 0.31
H2afxP27661 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
H2afxP27661 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.99■□□□□ 0.31
H2afxP27661 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afxP27661 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afxP27661 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.99■□□□□ 0.31
H2afxP27661 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
H2afxP27661 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.99■□□□□ 0.31
H2afxP27661 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afxP27661 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afxP27661 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.99■□□□□ 0.31
H2afxP27661 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
H2afxP27661 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
H2afxP27661 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afxP27661 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afxP27661 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2afxP27661 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
H2afxP27661 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
H2afxP27661 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
H2afxP27661 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.98■□□□□ 0.31
H2afxP27661 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms