Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40lgP27548 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cd40lgP27548 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Cd40lgP27548 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Cd40lgP27548 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cd40lgP27548 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cd40lgP27548 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cd40lgP27548 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40lgP27548 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40lgP27548 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40lgP27548 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40lgP27548 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40lgP27548 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40lgP27548 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40lgP27548 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40lgP27548 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40lgP27548 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cd40lgP27548 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40lgP27548 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40lgP27548 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40lgP27548 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40lgP27548 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40lgP27548 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40lgP27548 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40lgP27548 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cd40lgP27548 Phf7-203ENSMUST00000226565 1971 ntBASIC14.94□□□□□ -0.02
Cd40lgP27548 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.94□□□□□ -0.02
Cd40lgP27548 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cd40lgP27548 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.94□□□□□ -0.02
Cd40lgP27548 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.94□□□□□ -0.02
Cd40lgP27548 Gm21362-201ENSMUST00000194272 928 ntBASIC14.94□□□□□ -0.02
Cd40lgP27548 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.94□□□□□ -0.02
Cd40lgP27548 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.94□□□□□ -0.02
Cd40lgP27548 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.94□□□□□ -0.02
Cd40lgP27548 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cd40lgP27548 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cd40lgP27548 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40lgP27548 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Cd40lgP27548 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cd40lgP27548 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cd40lgP27548 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.93□□□□□ -0.02
Cd40lgP27548 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.93□□□□□ -0.02
Cd40lgP27548 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cd40lgP27548 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Cd40lgP27548 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cd40lgP27548 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cd40lgP27548 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.92□□□□□ -0.02
Cd40lgP27548 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms