Protein–RNA interactions for Protein: P0DP28

Calm3, Calmodulin-3, mousemouse

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calm3P0DP28 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Calm3P0DP28 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Calm3P0DP28 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Calm3P0DP28 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.67■□□□□ 0.58
Calm3P0DP28 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.67■□□□□ 0.58
Calm3P0DP28 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Calm3P0DP28 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Calm3P0DP28 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.67■□□□□ 0.58
Calm3P0DP28 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.67■□□□□ 0.58
Calm3P0DP28 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Calm3P0DP28 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Calm3P0DP28 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Calm3P0DP28 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Calm3P0DP28 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Calm3P0DP28 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Calm3P0DP28 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Calm3P0DP28 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Calm3P0DP28 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Calm3P0DP28 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Calm3P0DP28 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Calm3P0DP28 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Calm3P0DP28 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Calm3P0DP28 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.66■□□□□ 0.58
Calm3P0DP28 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Calm3P0DP28 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Calm3P0DP28 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Calm3P0DP28 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.66■□□□□ 0.58
Calm3P0DP28 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Calm3P0DP28 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Calm3P0DP28 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Calm3P0DP28 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Calm3P0DP28 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.66■□□□□ 0.58
Calm3P0DP28 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.66■□□□□ 0.58
Calm3P0DP28 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.66■□□□□ 0.58
Calm3P0DP28 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Calm3P0DP28 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Calm3P0DP28 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Calm3P0DP28 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.66■□□□□ 0.58
Calm3P0DP28 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Calm3P0DP28 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Calm3P0DP28 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Calm3P0DP28 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Calm3P0DP28 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Calm3P0DP28 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Calm3P0DP28 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Calm3P0DP28 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Calm3P0DP28 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.65■□□□□ 0.58
Calm3P0DP28 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Calm3P0DP28 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Calm3P0DP28 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Calm3P0DP28 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Calm3P0DP28 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Calm3P0DP28 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.65■□□□□ 0.58
Calm3P0DP28 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Calm3P0DP28 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Calm3P0DP28 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Calm3P0DP28 Mir6404-201ENSMUST00000183699 94 ntBASIC18.65■□□□□ 0.58
Calm3P0DP28 Gm44454-201ENSMUST00000198541 138 ntBASIC18.65■□□□□ 0.58
Calm3P0DP28 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.65■□□□□ 0.58
Calm3P0DP28 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Calm3P0DP28 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Calm3P0DP28 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Calm3P0DP28 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Calm3P0DP28 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Calm3P0DP28 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Calm3P0DP28 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.65■□□□□ 0.58
Calm3P0DP28 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.65■□□□□ 0.58
Calm3P0DP28 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Calm3P0DP28 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.65■□□□□ 0.58
Calm3P0DP28 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Calm3P0DP28 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Calm3P0DP28 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Calm3P0DP28 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Calm3P0DP28 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Calm3P0DP28 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Calm3P0DP28 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Calm3P0DP28 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.64■□□□□ 0.57
Calm3P0DP28 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Calm3P0DP28 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Calm3P0DP28 Gm15372-201ENSMUST00000120729 834 ntBASIC18.64■□□□□ 0.57
Calm3P0DP28 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.64■□□□□ 0.57
Calm3P0DP28 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Calm3P0DP28 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Calm3P0DP28 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Calm3P0DP28 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Calm3P0DP28 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Calm3P0DP28 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Calm3P0DP28 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Calm3P0DP28 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Calm3P0DP28 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Calm3P0DP28 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Calm3P0DP28 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Calm3P0DP28 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Calm3P0DP28 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Calm3P0DP28 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Calm3P0DP28 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Calm3P0DP28 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Calm3P0DP28 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Calm3P0DP28 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Calm3P0DP28 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms