Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxc9P09633 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxc9P09633 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxc9P09633 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxc9P09633 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.96■□□□□ 0.95
Hoxc9P09633 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxc9P09633 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc9P09633 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc9P09633 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.95■□□□□ 0.94
Hoxc9P09633 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc9P09633 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.95■□□□□ 0.94
Hoxc9P09633 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.95■□□□□ 0.94
Hoxc9P09633 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
Hoxc9P09633 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.95■□□□□ 0.94
Hoxc9P09633 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Hoxc9P09633 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.95■□□□□ 0.94
Hoxc9P09633 Gm45167-201ENSMUST00000208007 322 ntBASIC20.95■□□□□ 0.94
Hoxc9P09633 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc9P09633 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc9P09633 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.95■□□□□ 0.94
Hoxc9P09633 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc9P09633 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.95■□□□□ 0.94
Hoxc9P09633 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc9P09633 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc9P09633 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC20.95■□□□□ 0.94
Hoxc9P09633 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc9P09633 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc9P09633 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxc9P09633 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Hoxc9P09633 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc9P09633 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc9P09633 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc9P09633 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Hoxc9P09633 AC093926.2-201ENSMUST00000214468 1228 ntBASIC20.94■□□□□ 0.94
Hoxc9P09633 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc9P09633 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc9P09633 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc9P09633 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc9P09633 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc9P09633 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc9P09633 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc9P09633 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc9P09633 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc9P09633 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.94■□□□□ 0.94
Hoxc9P09633 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxc9P09633 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.94■□□□□ 0.94
Hoxc9P09633 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc9P09633 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc9P09633 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Hoxc9P09633 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc9P09633 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.93■□□□□ 0.94
Hoxc9P09633 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc9P09633 Gm4899-201ENSMUST00000178708 719 ntBASIC20.93■□□□□ 0.94
Hoxc9P09633 Mir8117-201ENSMUST00000184773 107 ntBASIC20.93■□□□□ 0.94
Hoxc9P09633 Gm37153-201ENSMUST00000193637 231 ntBASIC20.93■□□□□ 0.94
Hoxc9P09633 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc9P09633 AC131709.1-201ENSMUST00000224731 1180 ntBASIC20.93■□□□□ 0.94
Hoxc9P09633 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.93■□□□□ 0.94
Hoxc9P09633 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc9P09633 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.93■□□□□ 0.94
Hoxc9P09633 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc9P09633 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc9P09633 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc9P09633 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc9P09633 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxc9P09633 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc9P09633 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc9P09633 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc9P09633 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc9P09633 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc9P09633 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Hoxc9P09633 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc9P09633 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc9P09633 Gm8344-201ENSMUST00000119813 856 ntBASIC20.92■□□□□ 0.94
Hoxc9P09633 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc9P09633 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC20.92■□□□□ 0.94
Hoxc9P09633 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.92■□□□□ 0.94
Hoxc9P09633 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc9P09633 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc9P09633 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc9P09633 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc9P09633 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc9P09633 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc9P09633 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxc9P09633 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc9P09633 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Hoxc9P09633 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC20.91■□□□□ 0.94
Hoxc9P09633 Gm27300-201ENSMUST00000184085 97 ntBASIC20.91■□□□□ 0.94
Hoxc9P09633 Gm27335-201ENSMUST00000184758 97 ntBASIC20.91■□□□□ 0.94
Hoxc9P09633 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc9P09633 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc9P09633 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.91■□□□□ 0.94
Hoxc9P09633 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.91■□□□□ 0.94
Hoxc9P09633 AC147366.1-201ENSMUST00000227671 852 ntBASIC20.91■□□□□ 0.94
Hoxc9P09633 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc9P09633 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc9P09633 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
Hoxc9P09633 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxc9P09633 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Hoxc9P09633 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms