Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.22■□□□□ 0.35
Hoxc8P09025 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.22■□□□□ 0.35
Hoxc8P09025 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.22■□□□□ 0.35
Hoxc8P09025 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc8P09025 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc8P09025 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc8P09025 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Hoxc8P09025 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc8P09025 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc8P09025 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.21■□□□□ 0.35
Hoxc8P09025 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc8P09025 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc8P09025 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc8P09025 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Hoxc8P09025 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc8P09025 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc8P09025 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.21■□□□□ 0.35
Hoxc8P09025 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.21■□□□□ 0.35
Hoxc8P09025 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Hoxc8P09025 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxc8P09025 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Hoxc8P09025 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hoxc8P09025 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc8P09025 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc8P09025 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc8P09025 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc8P09025 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc8P09025 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc8P09025 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc8P09025 Gm13216-201ENSMUST00000117145 591 ntBASIC17.2■□□□□ 0.34
Hoxc8P09025 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc8P09025 Gm6257-201ENSMUST00000163864 910 ntBASIC17.2■□□□□ 0.34
Hoxc8P09025 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc8P09025 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.2■□□□□ 0.34
Hoxc8P09025 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc8P09025 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.2■□□□□ 0.34
Hoxc8P09025 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc8P09025 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc8P09025 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc8P09025 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc8P09025 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc8P09025 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxc8P09025 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc8P09025 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Hoxc8P09025 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc8P09025 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc8P09025 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.19■□□□□ 0.34
Hoxc8P09025 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc8P09025 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hoxc8P09025 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.19■□□□□ 0.34
Hoxc8P09025 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc8P09025 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.19■□□□□ 0.34
Hoxc8P09025 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hoxc8P09025 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.19■□□□□ 0.34
Hoxc8P09025 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc8P09025 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Hoxc8P09025 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc8P09025 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc8P09025 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxc8P09025 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc8P09025 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc8P09025 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc8P09025 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc8P09025 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc8P09025 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hoxc8P09025 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.18■□□□□ 0.34
Hoxc8P09025 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc8P09025 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hoxc8P09025 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.18■□□□□ 0.34
Hoxc8P09025 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.18■□□□□ 0.34
Hoxc8P09025 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Hoxc8P09025 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.18■□□□□ 0.34
Hoxc8P09025 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.18■□□□□ 0.34
Hoxc8P09025 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Hoxc8P09025 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.18■□□□□ 0.34
Hoxc8P09025 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.18■□□□□ 0.34
Hoxc8P09025 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.18■□□□□ 0.34
Hoxc8P09025 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.18■□□□□ 0.34
Hoxc8P09025 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hoxc8P09025 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc8P09025 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Hoxc8P09025 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.18■□□□□ 0.34
Hoxc8P09025 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc8P09025 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.18■□□□□ 0.34
Hoxc8P09025 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hoxc8P09025 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Hoxc8P09025 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.18■□□□□ 0.34
Hoxc8P09025 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hoxc8P09025 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms