Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PdgfrbP05622 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
PdgfrbP05622 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PdgfrbP05622 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PdgfrbP05622 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.39■□□□□ 0.21
PdgfrbP05622 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16.39■□□□□ 0.21
PdgfrbP05622 Gm37444-201ENSMUST00000193605 439 ntBASIC16.39■□□□□ 0.21
PdgfrbP05622 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.39■□□□□ 0.21
PdgfrbP05622 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PdgfrbP05622 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PdgfrbP05622 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PdgfrbP05622 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PdgfrbP05622 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PdgfrbP05622 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PdgfrbP05622 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PdgfrbP05622 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PdgfrbP05622 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PdgfrbP05622 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PdgfrbP05622 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PdgfrbP05622 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PdgfrbP05622 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PdgfrbP05622 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PdgfrbP05622 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PdgfrbP05622 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PdgfrbP05622 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PdgfrbP05622 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.38■□□□□ 0.21
PdgfrbP05622 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
PdgfrbP05622 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PdgfrbP05622 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PdgfrbP05622 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PdgfrbP05622 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PdgfrbP05622 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PdgfrbP05622 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.37■□□□□ 0.21
PdgfrbP05622 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PdgfrbP05622 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PdgfrbP05622 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PdgfrbP05622 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PdgfrbP05622 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PdgfrbP05622 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
PdgfrbP05622 Gm25016-201ENSMUST00000158399 131 ntBASIC16.37■□□□□ 0.21
PdgfrbP05622 Gm29518-201ENSMUST00000190858 372 ntBASIC16.37■□□□□ 0.21
PdgfrbP05622 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.37■□□□□ 0.21
PdgfrbP05622 Gm17808-201ENSMUST00000200859 894 ntBASIC16.37■□□□□ 0.21
PdgfrbP05622 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PdgfrbP05622 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.37■□□□□ 0.21
PdgfrbP05622 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PdgfrbP05622 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PdgfrbP05622 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PdgfrbP05622 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PdgfrbP05622 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PdgfrbP05622 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
PdgfrbP05622 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PdgfrbP05622 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PdgfrbP05622 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PdgfrbP05622 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PdgfrbP05622 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PdgfrbP05622 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PdgfrbP05622 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PdgfrbP05622 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PdgfrbP05622 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PdgfrbP05622 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PdgfrbP05622 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PdgfrbP05622 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PdgfrbP05622 Gm11950-201ENSMUST00000121615 838 ntBASIC16.36■□□□□ 0.21
PdgfrbP05622 Gm10052-201ENSMUST00000168019 960 ntBASIC16.36■□□□□ 0.21
PdgfrbP05622 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PdgfrbP05622 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PdgfrbP05622 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PdgfrbP05622 Gm7729-201ENSMUST00000050143 801 ntBASIC16.36■□□□□ 0.21
PdgfrbP05622 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PdgfrbP05622 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
PdgfrbP05622 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PdgfrbP05622 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PdgfrbP05622 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PdgfrbP05622 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.36■□□□□ 0.21
PdgfrbP05622 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms