Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Hoxa3P02831 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxa3P02831 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxa3P02831 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Hoxa3P02831 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxa3P02831 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxa3P02831 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxa3P02831 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxa3P02831 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxa3P02831 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.58□□□□□ -0.24
Hoxa3P02831 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.57□□□□□ -0.24
Hoxa3P02831 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.57□□□□□ -0.24
Hoxa3P02831 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.57□□□□□ -0.24
Hoxa3P02831 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.57□□□□□ -0.24
Hoxa3P02831 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.57□□□□□ -0.24
Hoxa3P02831 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.57□□□□□ -0.24
Hoxa3P02831 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Gm7461-201ENSMUST00000058918 827 ntBASIC13.57□□□□□ -0.24
Hoxa3P02831 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.57□□□□□ -0.24
Hoxa3P02831 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxa3P02831 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Hoxa3P02831 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Hoxa3P02831 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.56□□□□□ -0.24
Hoxa3P02831 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hoxa3P02831 Gm12895-201ENSMUST00000122214 226 ntBASIC13.56□□□□□ -0.24
Hoxa3P02831 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Hoxa3P02831 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.56□□□□□ -0.24
Hoxa3P02831 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.56□□□□□ -0.24
Hoxa3P02831 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.56□□□□□ -0.24
Hoxa3P02831 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.56□□□□□ -0.24
Hoxa3P02831 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Hoxa3P02831 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Hoxa3P02831 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hoxa3P02831 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxa3P02831 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxa3P02831 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxa3P02831 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxa3P02831 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Hoxa3P02831 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxa3P02831 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxa3P02831 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hoxa3P02831 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Hoxa3P02831 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Hoxa3P02831 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxa3P02831 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxa3P02831 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Hoxa3P02831 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.55□□□□□ -0.24
Hoxa3P02831 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
Hoxa3P02831 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxa3P02831 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Hoxa3P02831 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.55□□□□□ -0.24
Hoxa3P02831 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxa3P02831 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Hoxa3P02831 Birc2-201ENSMUST00000054878 378 ntBASIC13.55□□□□□ -0.24
Hoxa3P02831 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxa3P02831 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxa3P02831 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxa3P02831 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Hoxa3P02831 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxa3P02831 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Hoxa3P02831 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hoxa3P02831 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms