Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01852 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
P01852 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
P01852 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01852 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.82□□□□□ -0.04
P01852 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01852 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01852 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
P01852 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01852 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01852 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01852 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01852 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01852 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01852 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
P01852 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.81□□□□□ -0.04
P01852 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
P01852 Gm10052-201ENSMUST00000168019 960 ntBASIC14.81□□□□□ -0.04
P01852 Gm7729-201ENSMUST00000050143 801 ntBASIC14.81□□□□□ -0.04
P01852 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
P01852 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01852 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01852 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
P01852 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
P01852 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
P01852 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
P01852 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.8□□□□□ -0.04
P01852 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.8□□□□□ -0.04
P01852 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.8□□□□□ -0.04
P01852 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
P01852 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Gm15794-201ENSMUST00000120182 631 ntBASIC14.8□□□□□ -0.04
P01852 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
P01852 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
P01852 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.8□□□□□ -0.04
P01852 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
P01852 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P01852 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
P01852 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
P01852 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.79□□□□□ -0.04
P01852 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.79□□□□□ -0.04
P01852 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.79□□□□□ -0.04
P01852 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
P01852 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.79□□□□□ -0.04
P01852 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
P01852 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
P01852 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
P01852 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
P01852 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
P01852 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01852 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
P01852 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01852 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01852 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
P01852 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
P01852 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01852 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
P01852 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms