Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Gm6345-202ENSMUST00000180900 204 ntBASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.03□□□□□ -0.16
Igh-VJ558P01758 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Igh-VJ558P01758 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Igh-VJ558P01758 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Igh-VJ558P01758 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Igh-VJ558P01758 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.02□□□□□ -0.16
Igh-VJ558P01758 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Igh-VJ558P01758 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Igh-VJ558P01758 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Igh-VJ558P01758 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Igh-VJ558P01758 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Igh-VJ558P01758 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Igh-VJ558P01758 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.02□□□□□ -0.16
Igh-VJ558P01758 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Igh-VJ558P01758 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Igh-VJ558P01758 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Igh-VJ558P01758 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.02□□□□□ -0.16
Igh-VJ558P01758 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.02□□□□□ -0.17
Igh-VJ558P01758 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.02□□□□□ -0.17
Igh-VJ558P01758 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Igh-VJ558P01758 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Gm6623-201ENSMUST00000173570 544 ntBASIC14.01□□□□□ -0.17
Igh-VJ558P01758 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igh-VJ558P01758 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Igh-VJ558P01758 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Igh-VJ558P01758 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Igh-VJ558P01758 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Igh-VJ558P01758 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Igh-VJ558P01758 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Igh-VJ558P01758 Gm8258-201ENSMUST00000055593 1449 ntBASIC14□□□□□ -0.17
Igh-VJ558P01758 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Igh-VJ558P01758 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14□□□□□ -0.17
Igh-VJ558P01758 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Igh-VJ558P01758 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14□□□□□ -0.17
Igh-VJ558P01758 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14□□□□□ -0.17
Igh-VJ558P01758 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14□□□□□ -0.17
Igh-VJ558P01758 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Igh-VJ558P01758 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Igh-VJ558P01758 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Igh-VJ558P01758 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms