Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.64■□□□□ 0.25
Syn1O88935 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Syn1O88935 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syn1O88935 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syn1O88935 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syn1O88935 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Syn1O88935 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syn1O88935 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.63■□□□□ 0.25
Syn1O88935 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syn1O88935 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.63■□□□□ 0.25
Syn1O88935 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syn1O88935 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syn1O88935 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syn1O88935 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syn1O88935 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.63■□□□□ 0.25
Syn1O88935 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syn1O88935 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.63■□□□□ 0.25
Syn1O88935 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syn1O88935 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syn1O88935 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.63■□□□□ 0.25
Syn1O88935 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syn1O88935 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syn1O88935 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syn1O88935 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syn1O88935 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Syn1O88935 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Syn1O88935 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.62■□□□□ 0.25
Syn1O88935 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Syn1O88935 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syn1O88935 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.62■□□□□ 0.25
Syn1O88935 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Syn1O88935 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.62■□□□□ 0.25
Syn1O88935 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.62■□□□□ 0.25
Syn1O88935 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syn1O88935 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syn1O88935 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syn1O88935 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Syn1O88935 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.62■□□□□ 0.25
Syn1O88935 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syn1O88935 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syn1O88935 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syn1O88935 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Syn1O88935 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Syn1O88935 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syn1O88935 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Syn1O88935 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Syn1O88935 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Syn1O88935 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syn1O88935 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syn1O88935 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.61■□□□□ 0.25
Syn1O88935 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.61■□□□□ 0.25
Syn1O88935 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.61■□□□□ 0.25
Syn1O88935 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.61■□□□□ 0.25
Syn1O88935 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.61■□□□□ 0.25
Syn1O88935 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.61■□□□□ 0.25
Syn1O88935 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.61■□□□□ 0.25
Syn1O88935 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syn1O88935 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.61■□□□□ 0.25
Syn1O88935 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syn1O88935 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syn1O88935 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.61■□□□□ 0.25
Syn1O88935 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syn1O88935 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.61■□□□□ 0.25
Syn1O88935 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Syn1O88935 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syn1O88935 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syn1O88935 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Syn1O88935 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syn1O88935 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syn1O88935 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Syn1O88935 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Syn1O88935 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syn1O88935 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syn1O88935 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Syn1O88935 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Syn1O88935 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syn1O88935 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syn1O88935 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.6■□□□□ 0.25
Syn1O88935 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.6■□□□□ 0.25
Syn1O88935 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.6■□□□□ 0.25
Syn1O88935 Mir7023-201ENSMUST00000185093 64 ntBASIC16.6■□□□□ 0.25
Syn1O88935 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syn1O88935 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syn1O88935 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syn1O88935 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Syn1O88935 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syn1O88935 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syn1O88935 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Syn1O88935 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Syn1O88935 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Gm11424-201ENSMUST00000121929 829 ntBASIC16.59■□□□□ 0.25
Syn1O88935 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms