Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CcnkO88874 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CcnkO88874 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CcnkO88874 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CcnkO88874 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CcnkO88874 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CcnkO88874 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CcnkO88874 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CcnkO88874 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CcnkO88874 Gm17661-201ENSMUST00000170317 270 ntBASIC14.45□□□□□ -0.1
CcnkO88874 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.45□□□□□ -0.1
CcnkO88874 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CcnkO88874 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CcnkO88874 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CcnkO88874 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CcnkO88874 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CcnkO88874 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.45□□□□□ -0.1
CcnkO88874 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CcnkO88874 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.44□□□□□ -0.1
CcnkO88874 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CcnkO88874 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.44□□□□□ -0.1
CcnkO88874 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
CcnkO88874 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.44□□□□□ -0.1
CcnkO88874 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CcnkO88874 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.44□□□□□ -0.1
CcnkO88874 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnkO88874 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CcnkO88874 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.43□□□□□ -0.1
CcnkO88874 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.43□□□□□ -0.1
CcnkO88874 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CcnkO88874 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.43□□□□□ -0.1
CcnkO88874 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.43□□□□□ -0.1
CcnkO88874 Gm38027-201ENSMUST00000192315 235 ntBASIC14.43□□□□□ -0.1
CcnkO88874 Timm23-208ENSMUST00000226683 750 ntBASIC14.43□□□□□ -0.1
CcnkO88874 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CcnkO88874 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CcnkO88874 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CcnkO88874 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnkO88874 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CcnkO88874 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CcnkO88874 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.42□□□□□ -0.1
CcnkO88874 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.42□□□□□ -0.1
CcnkO88874 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CcnkO88874 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CcnkO88874 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.42□□□□□ -0.1
CcnkO88874 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Gm12085-201ENSMUST00000119263 940 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms