Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a20bO88575 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a20bO88575 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a20bO88575 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.62■□□□□ 0.41
Slc6a20bO88575 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a20bO88575 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Mir6404-201ENSMUST00000183699 94 ntBASIC17.61■□□□□ 0.41
Slc6a20bO88575 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.61■□□□□ 0.41
Slc6a20bO88575 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Slc6a20bO88575 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.61■□□□□ 0.41
Slc6a20bO88575 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.61■□□□□ 0.41
Slc6a20bO88575 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a20bO88575 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a20bO88575 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Slc6a20bO88575 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a20bO88575 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a20bO88575 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm8825-201ENSMUST00000182565 998 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm4518-201ENSMUST00000182638 718 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm20949-201ENSMUST00000206478 952 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a20bO88575 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.6■□□□□ 0.41
Slc6a20bO88575 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a20bO88575 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a20bO88575 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.6■□□□□ 0.41
Slc6a20bO88575 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Slc6a20bO88575 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.6■□□□□ 0.41
Slc6a20bO88575 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Slc6a20bO88575 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Slc6a20bO88575 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a20bO88575 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.59■□□□□ 0.41
Slc6a20bO88575 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a20bO88575 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Slc6a20bO88575 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Slc6a20bO88575 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.59■□□□□ 0.41
Slc6a20bO88575 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Slc6a20bO88575 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a20bO88575 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a20bO88575 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a20bO88575 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a20bO88575 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a20bO88575 Gm27494-201ENSMUST00000184735 189 ntBASIC17.59■□□□□ 0.41
Slc6a20bO88575 Gm37153-201ENSMUST00000193637 231 ntBASIC17.59■□□□□ 0.41
Slc6a20bO88575 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a20bO88575 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a20bO88575 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.59■□□□□ 0.41
Slc6a20bO88575 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a20bO88575 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a20bO88575 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a20bO88575 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Slc6a20bO88575 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a20bO88575 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a20bO88575 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a20bO88575 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a20bO88575 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.58■□□□□ 0.41
Slc6a20bO88575 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a20bO88575 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a20bO88575 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a20bO88575 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a20bO88575 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a20bO88575 Mir1895-201ENSMUST00000122615 79 ntBASIC17.58■□□□□ 0.4
Slc6a20bO88575 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc6a20bO88575 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Slc6a20bO88575 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms