Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Cops3O88543 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.54□□□□□ -0.08
Cops3O88543 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops3O88543 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Cops3O88543 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops3O88543 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Cops3O88543 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Cops3O88543 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops3O88543 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.53□□□□□ -0.08
Cops3O88543 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops3O88543 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops3O88543 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cops3O88543 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops3O88543 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Cops3O88543 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops3O88543 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cops3O88543 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops3O88543 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cops3O88543 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops3O88543 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cops3O88543 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.53□□□□□ -0.08
Cops3O88543 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.53□□□□□ -0.08
Cops3O88543 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.53□□□□□ -0.08
Cops3O88543 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops3O88543 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cops3O88543 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops3O88543 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops3O88543 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops3O88543 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops3O88543 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops3O88543 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops3O88543 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.52□□□□□ -0.08
Cops3O88543 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cops3O88543 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.52□□□□□ -0.08
Cops3O88543 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops3O88543 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops3O88543 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops3O88543 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops3O88543 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops3O88543 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops3O88543 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops3O88543 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops3O88543 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops3O88543 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops3O88543 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cops3O88543 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops3O88543 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops3O88543 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops3O88543 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops3O88543 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops3O88543 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops3O88543 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops3O88543 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops3O88543 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cops3O88543 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops3O88543 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops3O88543 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops3O88543 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops3O88543 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cops3O88543 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.51□□□□□ -0.09
Cops3O88543 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.51□□□□□ -0.09
Cops3O88543 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.51□□□□□ -0.09
Cops3O88543 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.51□□□□□ -0.09
Cops3O88543 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.51□□□□□ -0.09
Cops3O88543 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.51□□□□□ -0.09
Cops3O88543 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.51□□□□□ -0.09
Cops3O88543 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops3O88543 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Cops3O88543 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.5□□□□□ -0.09
Cops3O88543 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms