Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.74■□□□□ 0.11
Cacna1hO88427 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cacna1hO88427 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.74■□□□□ 0.11
Cacna1hO88427 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 Gm8344-201ENSMUST00000119813 856 ntBASIC15.74■□□□□ 0.11
Cacna1hO88427 Gm12151-201ENSMUST00000121374 290 ntBASIC15.74■□□□□ 0.11
Cacna1hO88427 Gm27989-201ENSMUST00000184721 107 ntBASIC15.74■□□□□ 0.11
Cacna1hO88427 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 Gm6007-201ENSMUST00000208170 823 ntBASIC15.74■□□□□ 0.11
Cacna1hO88427 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.74■□□□□ 0.11
Cacna1hO88427 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cacna1hO88427 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Cacna1hO88427 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cacna1hO88427 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.73■□□□□ 0.11
Cacna1hO88427 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Cacna1hO88427 Gm5779-201ENSMUST00000218467 910 ntBASIC15.73■□□□□ 0.11
Cacna1hO88427 Gm18622-201ENSMUST00000219361 595 ntBASIC15.73■□□□□ 0.11
Cacna1hO88427 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1hO88427 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cacna1hO88427 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1hO88427 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cacna1hO88427 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.73■□□□□ 0.11
Cacna1hO88427 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1hO88427 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1hO88427 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Cacna1hO88427 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.73■□□□□ 0.11
Cacna1hO88427 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1hO88427 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1hO88427 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1hO88427 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1hO88427 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Cacna1hO88427 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1hO88427 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cacna1hO88427 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1hO88427 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1hO88427 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1hO88427 Gm14719-201ENSMUST00000121891 340 ntBASIC15.72■□□□□ 0.11
Cacna1hO88427 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.72■□□□□ 0.11
Cacna1hO88427 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.72■□□□□ 0.11
Cacna1hO88427 Gm17837-201ENSMUST00000186435 985 ntBASIC15.72■□□□□ 0.11
Cacna1hO88427 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.72■□□□□ 0.11
Cacna1hO88427 Gm9899-201ENSMUST00000065519 555 ntBASIC15.72■□□□□ 0.11
Cacna1hO88427 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1hO88427 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1hO88427 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1hO88427 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1hO88427 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1hO88427 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1hO88427 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1hO88427 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cacna1hO88427 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cacna1hO88427 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1hO88427 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1hO88427 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.71■□□□□ 0.11
Cacna1hO88427 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cacna1hO88427 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.71■□□□□ 0.11
Cacna1hO88427 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1hO88427 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.71■□□□□ 0.11
Cacna1hO88427 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cacna1hO88427 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cacna1hO88427 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1hO88427 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1hO88427 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cacna1hO88427 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.71■□□□□ 0.11
Cacna1hO88427 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.71■□□□□ 0.11
Cacna1hO88427 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.71■□□□□ 0.11
Cacna1hO88427 Thap2-203ENSMUST00000218989 527 ntBASIC15.71■□□□□ 0.11
Cacna1hO88427 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.71■□□□□ 0.11
Cacna1hO88427 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1hO88427 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cacna1hO88427 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cacna1hO88427 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Cacna1hO88427 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cacna1hO88427 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.7■□□□□ 0.1
Cacna1hO88427 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.7■□□□□ 0.1
Cacna1hO88427 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cacna1hO88427 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cacna1hO88427 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.7■□□□□ 0.1
Cacna1hO88427 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms