Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnnt1O88346 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnnt1O88346 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnnt1O88346 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnnt1O88346 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Tnnt1O88346 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.66■□□□□ 0.9
Tnnt1O88346 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.66■□□□□ 0.9
Tnnt1O88346 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.66■□□□□ 0.9
Tnnt1O88346 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.66■□□□□ 0.9
Tnnt1O88346 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnnt1O88346 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.66■□□□□ 0.9
Tnnt1O88346 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnnt1O88346 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnnt1O88346 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnnt1O88346 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnnt1O88346 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnnt1O88346 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Tnnt1O88346 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnnt1O88346 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnnt1O88346 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Tnnt1O88346 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnnt1O88346 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.65■□□□□ 0.9
Tnnt1O88346 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnnt1O88346 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnnt1O88346 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Tnnt1O88346 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Tnnt1O88346 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.65■□□□□ 0.9
Tnnt1O88346 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnnt1O88346 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnnt1O88346 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnnt1O88346 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnnt1O88346 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnnt1O88346 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.65■□□□□ 0.9
Tnnt1O88346 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnnt1O88346 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnnt1O88346 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnnt1O88346 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnnt1O88346 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnnt1O88346 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnnt1O88346 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.64■□□□□ 0.89
Tnnt1O88346 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnnt1O88346 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.64■□□□□ 0.89
Tnnt1O88346 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnnt1O88346 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnnt1O88346 Rps4l-201ENSMUST00000071745 943 ntBASIC20.64■□□□□ 0.89
Tnnt1O88346 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnnt1O88346 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnnt1O88346 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Tnnt1O88346 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnnt1O88346 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.64■□□□□ 0.89
Tnnt1O88346 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Tnnt1O88346 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Tnnt1O88346 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnnt1O88346 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnnt1O88346 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnnt1O88346 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnnt1O88346 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.63■□□□□ 0.89
Tnnt1O88346 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.63■□□□□ 0.89
Tnnt1O88346 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Tnnt1O88346 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tnnt1O88346 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.63■□□□□ 0.89
Tnnt1O88346 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnnt1O88346 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Tnnt1O88346 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC20.63■□□□□ 0.89
Tnnt1O88346 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnnt1O88346 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnnt1O88346 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnnt1O88346 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnnt1O88346 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnnt1O88346 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnnt1O88346 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnnt1O88346 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnnt1O88346 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnnt1O88346 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnnt1O88346 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnnt1O88346 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnnt1O88346 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.62■□□□□ 0.89
Tnnt1O88346 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tnnt1O88346 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.62■□□□□ 0.89
Tnnt1O88346 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnnt1O88346 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnnt1O88346 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnnt1O88346 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.62■□□□□ 0.89
Tnnt1O88346 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnnt1O88346 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnnt1O88346 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
Tnnt1O88346 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnnt1O88346 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.62■□□□□ 0.89
Tnnt1O88346 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnnt1O88346 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tnnt1O88346 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnnt1O88346 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Tnnt1O88346 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnnt1O88346 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Tnnt1O88346 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnnt1O88346 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnnt1O88346 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tnnt1O88346 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnnt1O88346 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnnt1O88346 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms