Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ubr1O70481 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ubr1O70481 AC127302.2-201ENSMUST00000215212 268 ntBASIC20.91■□□□□ 0.94
Ubr1O70481 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC20.91■□□□□ 0.94
Ubr1O70481 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ubr1O70481 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ubr1O70481 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ubr1O70481 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ubr1O70481 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ubr1O70481 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ubr1O70481 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ubr1O70481 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr1O70481 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr1O70481 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr1O70481 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ubr1O70481 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Ubr1O70481 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ubr1O70481 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr1O70481 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.9■□□□□ 0.94
Ubr1O70481 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr1O70481 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr1O70481 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Ubr1O70481 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr1O70481 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr1O70481 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr1O70481 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr1O70481 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr1O70481 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr1O70481 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.9■□□□□ 0.94
Ubr1O70481 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Ubr1O70481 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr1O70481 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.9■□□□□ 0.94
Ubr1O70481 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Ubr1O70481 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Ubr1O70481 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ubr1O70481 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Ubr1O70481 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ubr1O70481 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ubr1O70481 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.89■□□□□ 0.93
Ubr1O70481 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ubr1O70481 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ubr1O70481 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ubr1O70481 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ubr1O70481 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ubr1O70481 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Ubr1O70481 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.88■□□□□ 0.93
Ubr1O70481 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ubr1O70481 Gm18489-201ENSMUST00000172565 551 ntBASIC20.88■□□□□ 0.93
Ubr1O70481 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr1O70481 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ubr1O70481 Gm5366-201ENSMUST00000215494 1338 ntBASIC20.87■□□□□ 0.93
Ubr1O70481 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubr1O70481 AC122024.2-201ENSMUST00000220086 871 ntBASIC20.87■□□□□ 0.93
Ubr1O70481 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubr1O70481 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ubr1O70481 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ubr1O70481 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubr1O70481 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubr1O70481 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC20.87■□□□□ 0.93
Ubr1O70481 Gm19164-201ENSMUST00000210667 640 ntBASIC20.87■□□□□ 0.93
Ubr1O70481 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubr1O70481 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.87■□□□□ 0.93
Ubr1O70481 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ubr1O70481 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ubr1O70481 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.86■□□□□ 0.93
Ubr1O70481 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Ubr1O70481 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC20.86■□□□□ 0.93
Ubr1O70481 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr1O70481 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ubr1O70481 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr1O70481 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.86■□□□□ 0.93
Ubr1O70481 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr1O70481 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr1O70481 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr1O70481 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr1O70481 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.85■□□□□ 0.93
Ubr1O70481 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
Ubr1O70481 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.85■□□□□ 0.93
Ubr1O70481 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubr1O70481 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.85■□□□□ 0.93
Ubr1O70481 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC20.85■□□□□ 0.93
Ubr1O70481 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms