Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.14■□□□□ 0.17
Pknox1O70477 Gm7213-201ENSMUST00000215977 950 ntBASIC16.14■□□□□ 0.17
Pknox1O70477 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pknox1O70477 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pknox1O70477 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pknox1O70477 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pknox1O70477 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pknox1O70477 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pknox1O70477 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.14■□□□□ 0.17
Pknox1O70477 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pknox1O70477 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.14■□□□□ 0.17
Pknox1O70477 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pknox1O70477 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pknox1O70477 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Pknox1O70477 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pknox1O70477 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pknox1O70477 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pknox1O70477 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pknox1O70477 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.13■□□□□ 0.17
Pknox1O70477 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.13■□□□□ 0.17
Pknox1O70477 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.13■□□□□ 0.17
Pknox1O70477 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pknox1O70477 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.13■□□□□ 0.17
Pknox1O70477 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.13■□□□□ 0.17
Pknox1O70477 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pknox1O70477 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pknox1O70477 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pknox1O70477 Gm18421-201ENSMUST00000204122 625 ntBASIC16.13■□□□□ 0.17
Pknox1O70477 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.13■□□□□ 0.17
Pknox1O70477 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pknox1O70477 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pknox1O70477 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pknox1O70477 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pknox1O70477 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pknox1O70477 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pknox1O70477 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pknox1O70477 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pknox1O70477 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pknox1O70477 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pknox1O70477 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pknox1O70477 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pknox1O70477 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pknox1O70477 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.12■□□□□ 0.17
Pknox1O70477 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.12■□□□□ 0.17
Pknox1O70477 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.12■□□□□ 0.17
Pknox1O70477 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pknox1O70477 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Pknox1O70477 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pknox1O70477 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pknox1O70477 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pknox1O70477 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pknox1O70477 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Pknox1O70477 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.11■□□□□ 0.17
Pknox1O70477 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.11■□□□□ 0.17
Pknox1O70477 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.11■□□□□ 0.17
Pknox1O70477 Gm29707-201ENSMUST00000196325 491 ntBASIC16.11■□□□□ 0.17
Pknox1O70477 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pknox1O70477 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.11■□□□□ 0.17
Pknox1O70477 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pknox1O70477 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Pknox1O70477 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pknox1O70477 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pknox1O70477 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pknox1O70477 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pknox1O70477 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pknox1O70477 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pknox1O70477 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pknox1O70477 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pknox1O70477 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pknox1O70477 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pknox1O70477 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pknox1O70477 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.1■□□□□ 0.17
Pknox1O70477 Gm11336-201ENSMUST00000118168 334 ntBASIC16.1■□□□□ 0.17
Pknox1O70477 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pknox1O70477 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.1■□□□□ 0.17
Pknox1O70477 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.1■□□□□ 0.17
Pknox1O70477 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pknox1O70477 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms