Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Mmp8O70138 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.77■□□□□ 0.76
Mmp8O70138 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.77■□□□□ 0.76
Mmp8O70138 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp8O70138 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Mmp8O70138 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp8O70138 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp8O70138 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Mmp8O70138 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp8O70138 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp8O70138 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.77■□□□□ 0.76
Mmp8O70138 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
Mmp8O70138 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Mmp8O70138 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Mmp8O70138 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Mmp8O70138 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.76■□□□□ 0.75
Mmp8O70138 Gm18669-201ENSMUST00000216049 778 ntBASIC19.76■□□□□ 0.75
Mmp8O70138 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.76■□□□□ 0.75
Mmp8O70138 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Mmp8O70138 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Mmp8O70138 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp8O70138 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp8O70138 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp8O70138 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp8O70138 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp8O70138 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp8O70138 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.75■□□□□ 0.75
Mmp8O70138 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp8O70138 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.75■□□□□ 0.75
Mmp8O70138 Gm44454-201ENSMUST00000198541 138 ntBASIC19.75■□□□□ 0.75
Mmp8O70138 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Mmp8O70138 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp8O70138 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp8O70138 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Mmp8O70138 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp8O70138 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Mmp8O70138 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp8O70138 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp8O70138 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp8O70138 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.74■□□□□ 0.75
Mmp8O70138 Gm28033-201ENSMUST00000184224 96 ntBASIC19.74■□□□□ 0.75
Mmp8O70138 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.74■□□□□ 0.75
Mmp8O70138 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp8O70138 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.74■□□□□ 0.75
Mmp8O70138 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp8O70138 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp8O70138 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Mmp8O70138 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Mmp8O70138 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp8O70138 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp8O70138 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.74■□□□□ 0.75
Mmp8O70138 Gm10819-201ENSMUST00000099988 561 ntBASIC19.74■□□□□ 0.75
Mmp8O70138 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp8O70138 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp8O70138 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp8O70138 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.73■□□□□ 0.75
Mmp8O70138 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Mmp8O70138 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Mmp8O70138 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp8O70138 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Mmp8O70138 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp8O70138 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp8O70138 Gm15372-201ENSMUST00000120729 834 ntBASIC19.73■□□□□ 0.75
Mmp8O70138 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.73■□□□□ 0.75
Mmp8O70138 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp8O70138 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.73■□□□□ 0.75
Mmp8O70138 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.73■□□□□ 0.75
Mmp8O70138 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.73■□□□□ 0.75
Mmp8O70138 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp8O70138 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp8O70138 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp8O70138 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp8O70138 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp8O70138 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp8O70138 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Mmp8O70138 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Mmp8O70138 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp8O70138 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp8O70138 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp8O70138 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Mmp8O70138 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp8O70138 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp8O70138 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp8O70138 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms