Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trdmt1O55055 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.81■□□□□ 0.44
Trdmt1O55055 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdmt1O55055 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trdmt1O55055 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trdmt1O55055 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trdmt1O55055 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trdmt1O55055 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.8■□□□□ 0.44
Trdmt1O55055 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Trdmt1O55055 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trdmt1O55055 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.8■□□□□ 0.44
Trdmt1O55055 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trdmt1O55055 Gm25911-201ENSMUST00000157621 56 ntBASIC17.8■□□□□ 0.44
Trdmt1O55055 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
Trdmt1O55055 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.8■□□□□ 0.44
Trdmt1O55055 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.8■□□□□ 0.44
Trdmt1O55055 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.8■□□□□ 0.44
Trdmt1O55055 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.8■□□□□ 0.44
Trdmt1O55055 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trdmt1O55055 Rarb-207ENSMUST00000225921 2756 ntBASIC17.8■□□□□ 0.44
Trdmt1O55055 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trdmt1O55055 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trdmt1O55055 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trdmt1O55055 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trdmt1O55055 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trdmt1O55055 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trdmt1O55055 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Trdmt1O55055 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trdmt1O55055 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trdmt1O55055 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trdmt1O55055 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trdmt1O55055 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trdmt1O55055 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Trdmt1O55055 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.79■□□□□ 0.44
Trdmt1O55055 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.79■□□□□ 0.44
Trdmt1O55055 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trdmt1O55055 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trdmt1O55055 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
Trdmt1O55055 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trdmt1O55055 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trdmt1O55055 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.79■□□□□ 0.44
Trdmt1O55055 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trdmt1O55055 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trdmt1O55055 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trdmt1O55055 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trdmt1O55055 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trdmt1O55055 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Trdmt1O55055 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trdmt1O55055 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trdmt1O55055 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.78■□□□□ 0.44
Trdmt1O55055 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.78■□□□□ 0.44
Trdmt1O55055 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trdmt1O55055 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trdmt1O55055 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trdmt1O55055 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trdmt1O55055 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trdmt1O55055 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trdmt1O55055 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trdmt1O55055 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trdmt1O55055 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trdmt1O55055 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.78■□□□□ 0.44
Trdmt1O55055 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trdmt1O55055 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trdmt1O55055 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trdmt1O55055 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trdmt1O55055 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trdmt1O55055 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trdmt1O55055 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trdmt1O55055 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.77■□□□□ 0.44
Trdmt1O55055 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.77■□□□□ 0.44
Trdmt1O55055 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trdmt1O55055 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trdmt1O55055 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trdmt1O55055 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trdmt1O55055 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.77■□□□□ 0.44
Trdmt1O55055 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trdmt1O55055 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trdmt1O55055 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trdmt1O55055 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trdmt1O55055 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trdmt1O55055 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Trdmt1O55055 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trdmt1O55055 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.77■□□□□ 0.44
Trdmt1O55055 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trdmt1O55055 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trdmt1O55055 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trdmt1O55055 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trdmt1O55055 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trdmt1O55055 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Trdmt1O55055 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.77■□□□□ 0.44
Trdmt1O55055 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.77■□□□□ 0.43
Trdmt1O55055 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trdmt1O55055 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trdmt1O55055 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trdmt1O55055 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Trdmt1O55055 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trdmt1O55055 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms