Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.59■□□□□ 0.25
Ptch2O35595 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.59■□□□□ 0.25
Ptch2O35595 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.59■□□□□ 0.25
Ptch2O35595 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ptch2O35595 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ptch2O35595 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ptch2O35595 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ptch2O35595 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ptch2O35595 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ptch2O35595 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ptch2O35595 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ptch2O35595 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ptch2O35595 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.59■□□□□ 0.25
Ptch2O35595 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ptch2O35595 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.58■□□□□ 0.25
Ptch2O35595 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ptch2O35595 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ptch2O35595 Gm1401-201ENSMUST00000122048 772 ntBASIC16.58■□□□□ 0.24
Ptch2O35595 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ptch2O35595 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ptch2O35595 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ptch2O35595 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.58■□□□□ 0.24
Ptch2O35595 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ptch2O35595 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ptch2O35595 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Ptch2O35595 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.57■□□□□ 0.24
Ptch2O35595 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ptch2O35595 Gm13418-201ENSMUST00000119097 944 ntBASIC16.57■□□□□ 0.24
Ptch2O35595 Gm12350-201ENSMUST00000121208 462 ntBASIC16.57■□□□□ 0.24
Ptch2O35595 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.57■□□□□ 0.24
Ptch2O35595 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.57■□□□□ 0.24
Ptch2O35595 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.57■□□□□ 0.24
Ptch2O35595 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.57■□□□□ 0.24
Ptch2O35595 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.57■□□□□ 0.24
Ptch2O35595 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ptch2O35595 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ptch2O35595 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ptch2O35595 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptch2O35595 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.56■□□□□ 0.24
Ptch2O35595 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptch2O35595 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.56■□□□□ 0.24
Ptch2O35595 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptch2O35595 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptch2O35595 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ptch2O35595 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.56■□□□□ 0.24
Ptch2O35595 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ptch2O35595 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ptch2O35595 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptch2O35595 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ptch2O35595 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptch2O35595 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptch2O35595 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptch2O35595 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ptch2O35595 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptch2O35595 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.56■□□□□ 0.24
Ptch2O35595 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptch2O35595 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptch2O35595 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptch2O35595 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptch2O35595 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ptch2O35595 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.56■□□□□ 0.24
Ptch2O35595 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ptch2O35595 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ptch2O35595 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptch2O35595 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptch2O35595 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptch2O35595 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ptch2O35595 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptch2O35595 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ptch2O35595 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptch2O35595 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.55■□□□□ 0.24
Ptch2O35595 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ptch2O35595 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.55■□□□□ 0.24
Ptch2O35595 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.55■□□□□ 0.24
Ptch2O35595 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ptch2O35595 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ptch2O35595 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptch2O35595 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.55■□□□□ 0.24
Ptch2O35595 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptch2O35595 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms