Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col15a1O35206 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col15a1O35206 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col15a1O35206 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col15a1O35206 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col15a1O35206 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.69■□□□□ 0.9
Col15a1O35206 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC20.69■□□□□ 0.9
Col15a1O35206 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col15a1O35206 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col15a1O35206 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col15a1O35206 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col15a1O35206 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col15a1O35206 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col15a1O35206 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Col15a1O35206 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col15a1O35206 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col15a1O35206 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col15a1O35206 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC20.68■□□□□ 0.9
Col15a1O35206 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.68■□□□□ 0.9
Col15a1O35206 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC20.68■□□□□ 0.9
Col15a1O35206 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col15a1O35206 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Col15a1O35206 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.68■□□□□ 0.9
Col15a1O35206 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col15a1O35206 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col15a1O35206 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col15a1O35206 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Col15a1O35206 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col15a1O35206 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col15a1O35206 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col15a1O35206 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.67■□□□□ 0.9
Col15a1O35206 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col15a1O35206 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.67■□□□□ 0.9
Col15a1O35206 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col15a1O35206 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col15a1O35206 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col15a1O35206 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col15a1O35206 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC20.67■□□□□ 0.9
Col15a1O35206 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC20.67■□□□□ 0.9
Col15a1O35206 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC20.67■□□□□ 0.9
Col15a1O35206 Gm10576-201ENSMUST00000191927 825 ntBASIC20.67■□□□□ 0.9
Col15a1O35206 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.67■□□□□ 0.9
Col15a1O35206 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.67■□□□□ 0.9
Col15a1O35206 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col15a1O35206 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col15a1O35206 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col15a1O35206 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col15a1O35206 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col15a1O35206 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.67■□□□□ 0.9
Col15a1O35206 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col15a1O35206 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col15a1O35206 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col15a1O35206 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col15a1O35206 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col15a1O35206 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC20.66■□□□□ 0.9
Col15a1O35206 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col15a1O35206 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Col15a1O35206 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col15a1O35206 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Col15a1O35206 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col15a1O35206 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col15a1O35206 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col15a1O35206 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Col15a1O35206 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.66■□□□□ 0.9
Col15a1O35206 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col15a1O35206 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col15a1O35206 Best4-ps-201ENSMUST00000129783 1380 ntBASIC20.65■□□□□ 0.9
Col15a1O35206 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col15a1O35206 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.65■□□□□ 0.9
Col15a1O35206 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Col15a1O35206 Gm44492-201ENSMUST00000197012 141 ntBASIC20.65■□□□□ 0.9
Col15a1O35206 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC20.65■□□□□ 0.9
Col15a1O35206 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col15a1O35206 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col15a1O35206 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col15a1O35206 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col15a1O35206 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Col15a1O35206 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col15a1O35206 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col15a1O35206 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.64■□□□□ 0.89
Col15a1O35206 Gm9682-201ENSMUST00000197505 556 ntBASIC20.64■□□□□ 0.89
Col15a1O35206 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.64■□□□□ 0.89
Col15a1O35206 AC154572.2-201ENSMUST00000225105 997 ntBASIC20.64■□□□□ 0.89
Col15a1O35206 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col15a1O35206 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col15a1O35206 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC20.64■□□□□ 0.89
Col15a1O35206 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col15a1O35206 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col15a1O35206 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col15a1O35206 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col15a1O35206 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.64■□□□□ 0.89
Col15a1O35206 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col15a1O35206 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col15a1O35206 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Col15a1O35206 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col15a1O35206 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.63■□□□□ 0.89
Col15a1O35206 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col15a1O35206 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col15a1O35206 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.63■□□□□ 0.89
Col15a1O35206 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms