Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Hdac1O09106 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Hdac1O09106 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.3■□□□□ 0.68
Hdac1O09106 Gm8520-201ENSMUST00000186517 868 ntBASIC19.3■□□□□ 0.68
Hdac1O09106 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Hdac1O09106 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Hdac1O09106 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Hdac1O09106 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac1O09106 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac1O09106 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac1O09106 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac1O09106 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac1O09106 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Hdac1O09106 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac1O09106 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Hdac1O09106 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac1O09106 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.29■□□□□ 0.68
Hdac1O09106 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac1O09106 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac1O09106 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac1O09106 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac1O09106 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.29■□□□□ 0.68
Hdac1O09106 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac1O09106 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hdac1O09106 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hdac1O09106 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC19.28■□□□□ 0.68
Hdac1O09106 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Gm16061-201ENSMUST00000122167 857 ntBASIC19.28■□□□□ 0.68
Hdac1O09106 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Hdac1O09106 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Hdac1O09106 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Hdac1O09106 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hdac1O09106 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Hdac1O09106 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac1O09106 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac1O09106 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac1O09106 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac1O09106 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.27■□□□□ 0.68
Hdac1O09106 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac1O09106 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Hdac1O09106 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hdac1O09106 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.27■□□□□ 0.68
Hdac1O09106 Gm7213-201ENSMUST00000215977 950 ntBASIC19.27■□□□□ 0.68
Hdac1O09106 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19.27■□□□□ 0.68
Hdac1O09106 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Hdac1O09106 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hdac1O09106 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hdac1O09106 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hdac1O09106 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Hdac1O09106 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Hdac1O09106 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.26■□□□□ 0.67
Hdac1O09106 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms